Pseudomonas chlororaphis subsp. aurantiaca: JM49_22145
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Entry
JM49_22145 CDS
T03338
Name
(GenBank) Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02020
Two-component system
pcp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JM49_22145
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JM49_22145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcp02022
]
JM49_22145
02035 Bacterial motility proteins [BR:
pcp02035
]
JM49_22145
Two-component system [BR:
pcp02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
JM49_22145
Bacterial motility proteins [BR:
pcp02035
]
Flagellar system
Flagellar assembly proteins
Others
JM49_22145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
HTH_20
AAA
HTH_30
AAA_3
MerR
Mg_chelatase
AAA_19
AAA_2
FleQ
HTH_24
HTH_23
nSTAND3
HTH_11
HTH_28
Sigma70_r4_2
AAA_7
AAA_22
RsiG
HTH_1
ATPase
DUF2249
HTH_17
AAA_14
Myosin_head
HTH_Mga
TIP49
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AIS14256
LinkDB
All DBs
Position
complement(4838253..4839662)
Genome browser
AA seq
469 aa
AA seq
DB search
MAIKVLLVEDDRALREALADTLLLAGHDYKAVGSAEEALEAVSGESFSLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVEAMRQGAADYLVKPFEPKALLDLVARHALG
CLGAAEGEGPVVFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSHRSSQ
PFIAINCAAIPDNMLEATLFGHEKGAFTGAIAAQPGKFEQADGGTLLLDEISEMPLALQA
KLLRVLQEREVERVGARKPIALDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLAKHVNKMKHAAARLSAEAQACLLGYPWPGNVRELDNAIQRALIL
QQGGLIQPEDFCLGGPLACAPLPAVAPAVVAAARSAPVEAEVQPAESAGGLGDDLRRREF
QMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaaggttctactggttgaagacgatcgcgccctgcgcgaggccctggcggat
acgctgctgttggccggtcatgactacaaggcggtcggcagcgcggaagaagcgctggag
gcggtgtctggcgagtcgttcagcctggtggtcagcgacgtcaacatgccgggcatggac
ggtcatcagttgctgggcctgctgcgtgcgcgccaaccgcaattgccggtcttgctgatg
accgcccatggcgcggtcgagcgggcggtcgaggccatgcgtcaaggcgccgccgactac
ctggtcaagcccttcgagcccaaggccctgctggatctggtggcgcgacatgccctgggt
tgcctgggggcggccgagggtgaagggccggtggtattcgagccggccagtgcgcagttg
ctcgagctggcggcgcgggtcgctcgcagtgactccacggtgctgatctctggcgagtcc
ggcaccggtaaagaggtgctggcgcgctacattcaccagcagtcccatcgttccagccag
ccctttatcgccatcaactgcgcggcgattccggacaacatgctcgaggccacactgttc
ggtcacgagaagggcgcctttaccggcgccatcgccgctcagcccggcaagttcgaacag
gccgatggcggcaccctgctgctggacgagatctccgaaatgcccctggctttgcaggcc
aagctgctgcgggtgctgcaggagcgcgaagtcgagcgggtcggggcgcgcaagcccatt
gccctggatatccgggtggtggcgaccaccaaccgcgacctggccggcgaagtggcggcg
gggcggttccgggaggatctttactatcggctgtcggtattcccgctggcttggcgcccg
ttgcgcgagcgtaccgccgatatcctgccgctggccgagcgtctgttggccaagcacgtc
aataaaatgaaacacgcggccgcccgattgtccgccgaggcgcaggcatgcctgctcggt
tatccgtggccgggcaatgtgcgtgaactggacaacgccatccagcgtgcgctgattttg
cagcagggcggcctgatccagccggaagatttctgcctgggcgggccgctggcctgtgcg
cccttgccggccgtggccccagccgtggtagcggcggcgcgcagtgcgccggtggaggcc
gaggtgcagcccgccgagtcggcggggggcttgggcgacgatctgcggcgccgggaattc
cagatgatcatcgacaccttgcgggccgagcgcggccggcgcaaggaggcggccgagcgc
ctgggtatcagcccgcgaaccttgcgctacaagttggcgcaaatgcgcgatgccggaatg
gatgtcgaggcgtatctgtttgcaacatga
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