Pseudomonas chlororaphis subsp. aurantiaca: JM49_22615
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Entry
JM49_22615 CDS
T03338
Name
(GenBank) AraC family transcriptional regulator
KO
K13652
AraC family transcriptional regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_22615
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JM49_22615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
HTH_AraC
Cass2
gag_pre-integrs
Motif
Other DBs
NCBI-ProteinID:
AIS14348
LinkDB
All DBs
Position
4944429..4945376
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AA seq
315 aa
AA seq
DB search
MSPAYHSLHEYTLRMNRVLEYIDQHLDQPLELAELAQVAHFSPFHFHRLFTAWVGETLGD
YLRRRRLACAAYQLASHPELSILEVALEVGFGSGEAFSRAFKQHFSVTPSTWRSTEPKRW
HRRLSDVRERRLRELSNPDQTHIPAFDDPDAFIHLKELTMNVTLKELPAVRVAYLRYIGP
YGPGIGTFWRDTVAPWMVENGLLGRARYGIGHDDPYVTPPEKCRYDACVEVPADFKASAP
AVVTTLLGGLYAVAHYQGKGPDIADAWTELCRDWLPKSGMQFDARPAFERYPVDAKYDMK
TGELECEICIPVKAL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgcctaccacagcctccacgaatacaccctacgcatgaaccgggtgctggag
tatatcgaccaacacctggaccagccgctggagctggccgaactcgcgcaggtcgcgcat
ttttcgccctttcacttccatcgcctgttcaccgcctgggtcggcgaaaccctgggcgac
tacctgcgccggcggcgcctggcctgtgctgcctatcagctggccagccatccggaattg
agcattctggaggtggcgctggaggtcggtttcggctccggcgaagcgttctcccgggcg
ttcaagcagcacttttcggtcaccccgagcacctggcgcagcaccgaacccaaacgctgg
caccgccgcctcagcgacgtccgcgaacggcgcctgcgagaattgagcaatcctgatcag
acacacatcccggccttcgacgatcctgacgccttcatccacctgaaggaactcacgatg
aacgtcaccctcaaggaactgcctgcagtccgcgtcgcctacttgcgctatatcggcccc
tacgggccgggcatcggcaccttctggcgcgacaccgtcgccccctggatggtcgaaaac
ggtctgctgggccgtgcgcgctacggcatcggccacgacgatccctacgtcaccccaccg
gaaaaatgccgctacgacgcctgcgtcgaagtccccgccgacttcaaggccagcgccccc
gccgtcgtcaccaccctgctcggcggcctctacgccgtcgcccactaccagggcaaaggc
cccgacatcgccgacgcctggaccgaactgtgccgcgactggctgcccaagagcggcatg
caattcgatgcccggccagcgttcgagcgttatccggtggacgcgaaatacgacatgaag
acgggggaactggagtgtgagatctgtattccggtgaaagcgttgtaa
DBGET
integrated database retrieval system
