Pseudomonas chlororaphis subsp. aurantiaca: JM49_23210
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Entry
JM49_23210 CDS
T03338
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcp03009
]
JM49_23210
Enzymes [BR:
pcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JM49_23210
Ribosome biogenesis [BR:
pcp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JM49_23210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIS14461
LinkDB
All DBs
Position
5095635..5096327
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AA seq
230 aa
AA seq
DB search
MRVDRFLSNLPRFNRQQVRLLLVAKRIRIDGQVVSDPHAEVREFSRVELDDEVLQAGKPP
RYFMLHKPMGCVSATRDPEHRTVLDLLDEPDKHELHIAGRLDYNTTGLLILTNDGNWSRR
LTQPQTKLPKRYYVETEQDIGPEYAETFARGLYFAFEDLTTLPAELQILGPRCARLSIVE
GRYHQVKRMFGHFDNKVLRLHRERMGPLALDENLAPGEYRPLTDEEIRLI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttgaccgcttcctcagtaacctgccccgcttcaaccgtcagcaggtgcgcctg
ttgctggtggcgaagcgcatccgcatcgacggccaagtggtcagcgatcctcatgccgag
gtgcgcgaattcagccgggtcgagctcgacgacgaagtgctgcaggccggcaagccaccg
cgctatttcatgctgcacaaacccatgggctgcgtcagcgccacccgcgatcccgagcac
cgcaccgtgctcgacctgctggacgaaccggacaagcacgagctgcacatcgccgggcgc
ctggactacaacaccaccggtttattgatcctcaccaacgacggcaactggtcgcgacgc
ctgacccagccgcagaccaaactgccgaagcgctattacgtcgagaccgaacaggacata
ggcccggagtacgccgagaccttcgcccggggcctgtacttcgccttcgaggacctcacc
accctgcccgccgagctgcagatcctcggcccccggtgcgcgcggctgagcatcgtcgaa
ggccgttaccaccaggtcaaacgcatgttcggccacttcgacaacaaggtcttgcgcctg
caccgcgaacgcatgggaccgctggccctcgatgaaaacctggcacccggcgagtaccgg
ccgctgaccgatgaagaaatccgcctgatctga
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