Pseudomonas chlororaphis subsp. aurantiaca: JM49_24290
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Entry
JM49_24290 CDS
T03338
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcp03016
]
JM49_24290
Enzymes [BR:
pcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JM49_24290
Transfer RNA biogenesis [BR:
pcp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JM49_24290
Prokaryotic type
JM49_24290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIS14666
LinkDB
All DBs
Position
complement(5305247..5306305)
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGEALGSAVLKATAEDFQVDEVLDIPLTGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSIQLPGKADPDLSAAENDTLKILKLTRHKR
KLQRGAHAANGFTLRLTELKADKAGIEERLQSIAKHGIPNYFGAQRFGHNGGNLVDARDW
AACKALPEQRNVRSRLLSTARSYLFNRVLAARVADGSWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGESPAAGATHLLEQQVAGDEADLRDWLIKAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgttgggcccgcgggcctatggcgaagccctgggcagcgcggta
ctgaaggccaccgccgaagacttccaggtcgacgaagtcctggacattcccctgaccggc
gaaggcgaacacctgtggttgtgggtggaaaagcgcggcctgaacaccgaagaagcggcg
cggcggattgccaaggccgcgggtgtgccgttgcgcaccgtcagctatgccggcttgaag
gatcgccaggcgctgacccggcagtggttcagcatccaactgcctggcaaggccgacccc
gatctgtcggcggctgaaaacgacaccctgaagatcctcaagctgacccgccacaagcgc
aagctgcaacgcggcgcccatgcggccaacggctttaccctgcgcctgaccgaattgaag
gcagacaaggcgggaatcgaagagcgcctgcaatcgatcgccaaacacggcatccccaat
tatttcggcgcccagcgttttggccataacggcggcaacctggtcgatgcccgcgattgg
gccgcctgcaaggccttgccggaacagcgcaacgtgcgttcgcggctgctttccaccgcg
cgcagctatctgttcaaccgggtgctggcggcgcgagtggccgatggcagctggcagcgg
gcccaggtcggcgacctgctggccttcaccgacagccgcagttttttcccggccggcgaa
gccgaatgcagcgatccgcgcctggccatcctcgacttgcacccgaccggcccgcagtgg
ggcgagggcgaatcgcctgctgcgggagcgacccatctgctggaacagcaggtggctggc
gacgaagcggatctgcgcgattggttgattaaagccggaatgagccacgaacgtcgcatc
ctgcggctgcccattggcgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtattggtgcgtgaactcgtcgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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