Pseudomonas chlororaphis subsp. aurantiaca: JM49_24330
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Entry
JM49_24330 CDS
T03338
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp00541
Biosynthesis of various nucleotide sugars
pcp01100
Metabolic pathways
pcp01250
Biosynthesis of nucleotide sugars
Module
pcp_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JM49_24330
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcp01005
]
JM49_24330
Enzymes [BR:
pcp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
JM49_24330
Lipopolysaccharide biosynthesis proteins [BR:
pcp01005
]
Lipid A
JM49_24330
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIS14674
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All DBs
Position
complement(5312645..5313490)
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AA seq
281 aa
AA seq
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MAQKIIRVGDIEIANDKPMVLFGGMNVLESRDMAMQVCEEYVKVTEKLGIPYVFKASFDK
ANRSSVTSYRGPGLEEGMRIFQDIKQAFGVPIITDVHEPYQAAVVAEVCDIIQLPAFLSR
QTDLVVAMAKTGAVINIKKAQFLAPQEMKHILSKCEEAGNDQLILCERGSSFGYNNLVVD
MLGFGIMKQFEYPVFFDVTHALQMPGGRADSAGGRRAQVTDLAKAGMSQSLAGLFLEAHP
DPDNAKCDGPCALRLDKLEPFLAQLKALDELVKSFPTVETA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaagatcatccgcgtcggcgatatcgagattgccaacgacaagcccatggtg
ctgttcggcggcatgaacgtgctggaaagccgtgacatggccatgcaggtctgcgaagag
tacgtgaaggtcaccgaaaagctcggtatcccttacgtgttcaaggccagtttcgacaag
gccaaccggtcttctgtgacctcttatcgtggtcctggcctggaagagggcatgcgcatc
ttccaggacatcaagcaagccttcggcgtgccgatcatcaccgacgtccacgagccttac
caggctgcggtcgtcgccgaggtctgcgacatcattcagctgccggccttcctgtcgcgc
cagaccgacctggtggtcgcgatggccaagaccggtgcagtgatcaacatcaagaaagcc
cagtttctcgcgccccaggaaatgaaacacatcctgagcaagtgcgaagaagcgggtaac
gatcagttgatcctctgcgagcgtggttcgagcttcggttacaacaacctggtggtagac
atgctcggcttcggcatcatgaagcagttcgaatacccggtgttcttcgacgtgacccac
gcgctgcaaatgcccggcggtcgtgccgactcggccggcggtcgtcgtgcccaggtcacc
gacctggccaaggccggcatgagccagtccctggccggcctgttcctggaagcccacccg
gacccggacaacgccaaatgcgacggtccatgcgccctgcgcctggacaagctcgaacct
ttcctggcccagctcaaggccctggacgaactggttaagagttttccgacggtagagacc
gcgtaa
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