Pseudomonas chlororaphis subsp. aurantiaca: JM49_24485
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Entry
JM49_24485 CDS
T03338
Name
(GenBank) thiamine biosynthesis protein ThiF
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcp03016
]
JM49_24485
Transfer RNA biogenesis [BR:
pcp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JM49_24485
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GFIT
Motif
Pfam:
ThiF
Pdase_C33_assoc
Sacchrp_dh_NADP
3HCDH_N
AlaDh_PNT_C
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
AIS14704
LinkDB
All DBs
Position
complement(5347861..5348676)
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AA seq
271 aa
AA seq
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MVMSTEDPRFAGVARLYGIEGLERLRAAHVAIVGVGGVGSWAAEAIARCGVGEISLFDLD
DVCVSNSNRQLHALDSTVGKAKVEVMAERLRGINPACTVHAVADFVTRETMAEYITPNID
CVIDCIDSVNAKAALIAWCKRRKIQIITTGGAGGQIDPTLIQVCDLNRTFNDPLASKVRS
TLRRDYGFSRTVTRHYSVPCVFSTEQLRYPKPDGSICLQKSFVGDGVKLDCAGGFGAVMM
VTATFGMVAATKAVDKLVAGVRRPADRVKPL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgagtacagaagatccgcggtttgctggcgtcgcccgtttgtatggcatcgag
gggctggaacgcttgcgcgccgcccatgtggcgatcgtcggggtcggcggtgtcggttcc
tgggcggcggaagccattgcccgttgcggcgtgggtgagatctcgctgttcgacctggac
gacgtctgtgtcagcaacagcaatcggcagttgcacgccctcgacagcacggtcggcaag
gccaaggtcgaggtcatggccgagcgcttgcgcgggatcaatccggcttgcaccgtgcat
gcggtggcagacttcgtcacccgcgagaccatggccgaatacatcacgccgaacatcgac
tgcgtgatcgactgcatcgacagcgtcaacgccaaggcggcgctgatcgcctggtgcaag
cggcgcaagatccagatcatcaccaccggcggcgcgggcgggcagatcgacccgacgctg
atccaggtctgtgacctgaaccgcaccttcaatgacccgttggcctcgaaagtgcgctcg
accctgcgtcgcgactacggtttttcccgcaccgtgacccgtcactacagcgtgccttgc
gtgttttccaccgagcaactgcgctacccgaaaccggacggcagcatctgcctgcagaag
agctttgtcggcgatggcgtgaagctcgactgcgccggcggttttggcgcggtgatgatg
gtgaccgcgaccttcggcatggtcgcggcgaccaaggcggtggacaaactggtggctggc
gtacggcgcccggcggaccgggtcaagcccctgtag
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