Pseudomonas chlororaphis subsp. aurantiaca: JM49_24685
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Entry
JM49_24685 CDS
T03338
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JM49_24685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_24685
Transporters [BR:
pcp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JM49_24685
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
AIS14744
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All DBs
Position
5393048..5394199
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AA seq
383 aa
AA seq
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MFVHKTALLSAITTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKNYDWVT
GFEKETGCKVNVKTAGTSDEMVSLMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNW
KNLDPRLKDAPWYVVNKQTYGTPYQWGPNVLMYNTTVFKQAPTSWSVLFDAQNLPDGKPN
KGRVQAYDGPIYIADAALYLKSAKPELGIQNPYELTEAQYKAVLDLLRAQQPLIHRYWHD
TTVQMSDFKNEGVVAASSWPYQVNGLINEKQPIASTIPKEGATGWADTTMLHSEAKHPNC
AYKWMDWSLTPKVQGDVAAWFGSLPAVPAACKESQLLGAEGCKTNGFDQFDKIAFWKTPQ
AEGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcacaagaccgcactgctcagtgcaatcaccaccgccctgctggccagcgcc
agcctccaggccgccgaaccgctcaaggccgtcggcgccggcgaaggtcagctggatatc
gtggcctggcccggctacatcgaacgtggcgaaagcgacaagaactacgactgggtcacc
ggcttcgagaaggagaccggttgcaaggtcaacgtcaagaccgcgggcacctccgacgag
atggtcagcctgatggccaagggcggctacgacctggtcaccgcgtccggcgacgcctcc
ctgcggctgatcgtcggcaagcgtgtgcagccgatcaacaccgcgctgattcccaactgg
aaaaacctcgatccgcgcctcaaggatgcgccctggtacgtggtcaataagcagacctac
ggcacgccctaccagtggggcccgaacgtgctgatgtacaacaccaccgtcttcaagcag
gcgccgaccagctggagcgtactgttcgacgcgcagaacctgccggacggcaagcccaac
aaaggccgcgtgcaggcctatgacgggccgatctacatcgccgacgccgcgctgtacctc
aagagcgcgaaaccggaactggggatccagaacccctacgaactgaccgaggcccagtac
aaggcggtgctcgacctgctgcgcgcccagcagccgctgatccaccgctactggcacgac
accacggtgcagatgagcgacttcaagaacgaaggcgtggtcgccgccagctcctggccg
tatcaggtcaacggcctgatcaacgagaagcagccgatcgcctcgaccattcccaaggaa
ggggccaccggctgggccgacaccaccatgctgcacagcgaggccaagcaccccaactgt
gcctacaagtggatggactggtcgctcacgccgaaggtccagggcgacgtcgccgcctgg
ttcggctcgctgccggccgtgccggcggcctgcaaggaaagccaactgctgggcgccgag
ggctgcaagaccaacggcttcgaccagttcgacaagatcgccttctggaaaaccccgcag
gccgagggcggcaagttcgtgccgtacagccgctggacccaggattacatcgcgatcatg
ggcggcaggtaa
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