Pseudomonas chlororaphis subsp. aurantiaca: JM49_24930
Help
Entry
JM49_24930 CDS
T03338
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JM49_24930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_24930
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JM49_24930
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JM49_24930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AIS14792
LinkDB
All DBs
Position
complement(5449057..5449746)
Genome browser
AA seq
229 aa
AA seq
DB search
MSSNAPIGQPAYVLHSRAYRESSALVDFLTPQGRLRAVLRGARGKAGTLARPFVPLEVEF
RGRGELKNVGRMESAGTSTWLNGEALFSGLYLNELLIRLLPAEDPHPAIFEHYAATLLAL
AEGRALEPLLRAFEWRLLDDLGYGFALDTDIHGAPIEAQGMYRLQVDAGLEQVQLLQPGL
FNGTELLAMAQADWSAPGALAAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaacgctcccatcggccagcccgcttacgtcctgcacagtcgcgcctatcgc
gagagcagtgcgttggtggacttcctcacgccccaagggcggctgcgcgcggtgttgcgt
ggcgcgcgcggcaaggccgggaccctggcgcggccgttcgtgccgctggaagtggagttt
cgtgggcgcggcgagctgaaaaacgtcgggcgcatggagagcgcgggaacctccacctgg
ctcaacggcgaggcgctgttcagcggtctctacctcaacgagctgctgattcgcctgctg
cccgccgaagatccgcatccggcgatcttcgagcactatgcggcgaccttgctggcgttg
gccgagggcagggctctggagcccttgctgcgtgccttcgagtggcgcctgctggacgac
ctgggctatggcttcgccctggacacggacatccacggcgcaccgatcgaggcgcagggc
atgtatcgcctgcaggtggatgccggcctggagcaggttcagctgttgcaaccgggcctg
ttcaacggcaccgagctgctggccatggcgcaagccgactggagcgcccccggcgcgctg
gcggcagccaagcgcctgatgcgccaggcgctggcggtgcacctgggcggtcggccattg
gtcagtcgcgaattgtttcgcaagccctag
DBGET
integrated database retrieval system
