Pseudomonas chlororaphis subsp. aurantiaca: JM49_25910
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Entry
JM49_25910 CDS
T03338
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02010
ABC transporters
pcp02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JM49_25910
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JM49_25910
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_25910
Transporters [BR:
pcp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
JM49_25910
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIS14986
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All DBs
Position
5647864..5649489
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AA seq
541 aa
AA seq
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MFKQAVIPLLVSAGLLASAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETIFNR
LSQFERGGTAVVPGLATSWDISDDGLTYTFHLRDGVKFHTTPYFKPTRDFNADDVLFTFN
RMLDKDMPFRKAYPTEFPYFTDMGMDTNITKVEKVDDKTVKFTLKTVDAAFIQNLAMSFA
SIQSAEYADQLLKEGKPGDINQKPIGTGPFVFKSYQKDSNIRYTGNKEYWKPEDVKIDNL
IFAITTDPSVRIQKLKKNECQVTLFPRPADLKTLGEDKTLKLPQQAGFNLGYIAYNVMPV
LKGRTDANPLADLKVRQALDMAVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDDTIKDAKY
DPEKAKALLKEAGIKEGTQITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVNIVSYEW
GEYIKRSKGGENQAMIIGWSGDNGDPDNWLGTLFGCDAMNGNNFSKWCDKPYDALIKQAK
ATPDVAKRTELYKQAQHLLKDQVPMTPIAHSTVFQPMRANVQDFKISPFGLNSFYGVSIS
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacaagcagtcattccgcttttagtcagcgccggcttgctcgccagcgcaccc
ttcgcccaggcagcgactaacctggtgttctgctccgaagggagcccggccggtttcgac
ccaggccagtacaccaccggaaccgacttcgacgcctcagcagaaactatcttcaaccgt
ctcagccagttcgagcgtggcggcaccgccgtcgttcctggcctggcgaccagttgggac
atttccgacgatggcctgacctacaccttccatctgcgcgatggggtgaagttccacacc
acgccgtacttcaagccgacccgtgatttcaacgccgacgacgtgctcttcacgttcaac
cgcatgctcgacaaggacatgccgttccgcaaggcgtacccgaccgaattcccttacttc
accgacatggggatggacaccaacatcaccaaggtcgagaaagtcgacgacaagaccgtc
aagttcaccctgaaaaccgtagacgccgcgttcatccagaacctggcgatgagcttcgcc
tccatccagtccgccgagtacgccgaccagctgctcaaggaaggcaagccgggcgacatc
aaccagaagccgatcggcactggcccgttcgtgttcaagagctaccagaaagactccaac
atccgttacaccggcaacaaggagtactggaagcctgaggacgtgaagatcgacaacctg
atcttcgccatcaccaccgacccgtcggtacgcatccagaagctgaaaaagaacgaatgc
caggtcaccctgttcccgcgcccggccgacctcaagaccctgggcgaggacaagaccctc
aagctgccgcagcaggccggcttcaacctcggctacatcgcctacaacgtgatgcctgtg
ctcaagggccgcaccgacgccaacccgctggccgacctcaaggtccgtcaggcgctggac
atggcggtgaacaagcagcagatcatcgactcggtctaccagggcgcgggccagctggcg
gtcaacgccatgccaccgacccagtggtcctatgacgacaccatcaaggatgccaagtac
gaccctgagaaagccaaggcgctgctcaaggaagccggcatcaaggaaggcacccagatc
accctgtgggccatgcccgtgcagcgtccgtacaacccgaacgccaagctgatggctgaa
atgctgcagtccgactgggcgaagatcggcctgaaggtcaacatcgtcagctacgaatgg
ggcgagtacatcaagcgttccaagggcggcgagaaccaggcgatgatcatcggctggagc
ggcgacaatggtgacccggacaactggctcggcaccctgttcggctgcgacgccatgaac
ggcaacaacttctccaaatggtgcgacaagccgtacgacgcactgatcaaacaagccaaa
gccaccccggacgtggccaaacgcaccgagctgtacaagcaggcgcaacacctcctcaaa
gaccaagtcccgatgacacctatcgctcactcgacggtgttccaacccatgcgcgccaac
gtgcaggacttcaagatcagcccctttggcctgaactcgttctacggcgtcagcatcagc
aaataa
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