Pseudomonas chlororaphis subsp. aurantiaca: JM49_25995
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Entry
JM49_25995 CDS
T03338
Name
(GenBank) ligand-gated channel protein
KO
K16090
catecholate siderophore receptor
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_25995
Transporters [BR:
pcp02000
]
Other transporters
Pores ion channels [TC:
1
]
JM49_25995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Lyase_8
Motif
Other DBs
NCBI-ProteinID:
AIS15003
LinkDB
All DBs
Position
5668899..5671172
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AA seq
757 aa
AA seq
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MSRQQPPLPLGSPRLLASAIGVAITAGSAAHMAFAAENTEKKAAGNAISLDATSITGEAQ
DQTSYQVEKASSQKYTAPLVNTPRSVTVVPQQVLKDTAATSLQDALRTVPGITFGAGEGG
NPQGDRPFIRGFDAQGDTYLDGVRDTGGQSREIFDIESIEVSKGPNSSFGGRGSAGGSLN
LVSKTPKQQDFLNGGFTYGSDQTRRYVLDVNRQFLDSAAFRLNLMSHEQNVAGRDAVNYD
RWGVAPSLTFGLGTPTRVNFSYYHMESDDLPDSGIPYGYSSASTTAHKHDKPTDGGDSDN
FYGLKDRDFRKTRADISTVSIEHDLNDNMTLKNTLRHGNTGQDYILTQPDDSKFNVNKYG
TVWRRANSRVSTTETTTNQTDLFGEFQALGFKHNYSTGLEFTGEETRVSSYNIAGNTAKV
CNPGSIPSCTSLSNPNPDDAWTGAISRNYYGTNTKATSRAAYVFDTIELDPQWLLNVGLR
YDTFDTVANTDTATGRTKIKDDSQFWNWQAGLVWKPTDNGSVYASYATSATPPGGLVGEG
ADGNPLSAGASVSDLQPEETVNYELGTKWDVFNDRLSLTAAVFRTEKKNTRILVDALTYQ
NAGESRVDGLELSASGKITDKWQVFAGYSYLKSELVDAGLNGRNGVVSAGSNKGNEMPNT
PKNSFSLWTTYEVLPKLTVGGGAFYVDEVYGDAGNTVYVPSYTRYDAMASYKLSKNVDLQ
LNVQNLTDKTYYDKAYSAHFANQAAGRTALFTTNFHF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccaacaaccaccattaccgctcggttcaccacgcctgctggcgtctgcaatt
ggcgtggcgatcaccgccggctccgcagcccatatggcttttgccgcggaaaacaccgag
aagaaagccgccggcaatgccatttccctggatgccaccagcatcaccggcgaagcccag
gaccagacgtcctaccaggtggaaaaggcctcgtcgcagaagtacaccgcgccgctggtc
aacaccccgcgctcggtcaccgtggtgcctcaacaagtcctcaaggacaccgccgccacc
tcgctgcaggatgcgctgcgcactgtaccgggcattaccttcggcgccggcgaaggcggc
aacccgcaaggcgaccgtccgttcatccgcggcttcgacgcccagggcgacacctacctc
gatggcgtgcgcgacaccggcggccagagccgcgagatcttcgacatcgaatcgatcgaa
gtcagcaagggccccaactcctccttcggcggtcgcggctcggccggcggcagcctcaat
ctggtgagcaagacgcccaagcagcaagacttcctcaacggtggcttcacctatggctcc
gaccagacccgccgttatgtgctggacgtgaaccgccagttcctcgacagcgccgccttc
cgcctgaacctgatgagccacgagcagaacgtggccggtcgcgacgccgtcaactacgac
cgctggggcgtggcaccgtccctgaccttcggcctgggcaccccgacccgcgtcaacttc
agctactaccacatggaaagcgacgacctgccggactcgggcattccctatggctacagc
tcggccagcaccaccgcccacaagcacgacaaaccgaccgacggcggcgacagcgacaac
ttctatggcttgaaggaccgtgacttccgcaagacccgcgcggacatcagcaccgtctcc
atcgagcacgacctgaacgacaacatgacgctgaaaaacaccctgcgtcatggcaacacc
ggccaggactacatcctcacccagccggacgacagcaagttcaacgtcaacaagtacggc
accgtatggcgtcgcgccaactcgcgggtgtccaccaccgaaaccaccaccaaccagacc
gacctgttcggcgaattccaggccctgggcttcaagcacaactactccaccggccttgag
ttcactggcgaagagactcgtgtcagcagctacaacatcgccggcaacaccgccaaggtc
tgtaacccgggcagcatcccgagctgcacctcgctgagcaacccgaacccggacgatgcc
tggaccggcgcgatcagccgcaactactacggcaccaacaccaaagccaccagccgcgcg
gcctatgtgttcgataccatcgagctcgatccgcaatggctgctgaacgtcggcctgcgc
tacgacaccttcgacaccgtggccaataccgatacagccaccgggcgcaccaagatcaag
gacgacagccagttctggaattggcaggccggcctggtgtggaaaccgacggacaacggc
agcgtctatgcctcctacgccacttcggcgacaccaccgggcggcctggtcggcgagggt
gcggacggcaacccgctgtccgccggcgccagcgtcagcgacctgcaaccggaagaaacc
gtcaactacgagctgggcaccaagtgggatgtgttcaacgaccgcctgtccctgaccgcc
gcggtgttccgtaccgagaagaaaaacacccgcatcctggtggacgccctgacctaccag
aacgccggcgagtcccgcgtcgacggcctggagctgtcggccagcggcaagatcaccgac
aagtggcaagtcttcgccggctacagctacctgaaaagcgagctggtggacgctggcctc
aacggtcgtaacggtgtggtcagcgccggttcgaacaaaggcaatgaaatgccgaacacg
ccgaaaaacagcttcagcctgtggaccacttatgaagtgctgccgaagctgaccgtgggc
ggcggtgcgttctatgtcgacgaggtgtatggcgatgccggcaataccgtgtacgtgccg
tcctacacccgctacgacgccatggccagctacaagctgagcaagaacgtcgacctgcag
ctgaacgtgcagaacctgaccgacaagacctactacgacaaagcctactcggcgcacttc
gccaaccaggcagccggccgtaccgccttgttcaccaccaacttccacttctga
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