Pseudomonas chlororaphis subsp. aurantiaca: JM49_26090
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Entry
JM49_26090 CDS
T03338
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcp03016
]
JM49_26090
Enzymes [BR:
pcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JM49_26090
Transfer RNA biogenesis [BR:
pcp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JM49_26090
Prokaryotic type
JM49_26090
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AIS15021
UniProt:
A0AAJ0ZQ57
LinkDB
All DBs
Position
complement(5697078..5697995)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGEVLQTREVTVGRADIEAVLPEFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFSLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggtatcatcctgctcgacaagccg
ctggggttcacctccaacgcggcgctgcagaaagtccgctggttgctcaacgccgaaaag
gccgggcacaccggcagcctcgatcccctggccaccggcgtgctgccgctgtgctttggc
gaggcgaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctgatg
caattgggtaagaccaccaccacggccgatgccgagggtgaagtcctgcagactcgcgaa
gtgaccgttggtcgcgccgatattgaagcggtgttgccggaatttcgtgggcaaatcagc
cagataccgccgatgtactcggccctcaagcgtgatggccagccactttacaagctggcc
cgtgcaggcgaagtggtggagcgcgaagcgcgttctgttactattgcgcgcttggaattg
ctggcctttgaaggcgatactgcgcggctagcggtggactgcagtaaaggcacctatatc
cggaccctggtggaggatatcggtgagaagctgggttgcggtgcttacgtcgcggaactg
cgtcgcacccaggccggtcctttcagtctggcccagaccgtcacgctggaagagcttgag
gcggtacatgccgaaggcggcaacgaagcggtggatcgcttcctgatgccatcggacagc
ggcctgctggattggccactgctgcagttctccgaacacagcgcgttctactggctcaac
ggccagccggtacgggctcccgatgcaccgaagttcggcatggtgcgggtacaggatcat
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcggaatga
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