KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_26580
Entry
JM49_26580        CDS       T03338                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JM49_26580
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_26580
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_26580
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Cue1_U7BR DUF2345 Lyx_isomer TraK_2
Other DBs
NCBI-ProteinID: AIS15112
LinkDB
Position
5797518..5799593
AA seq 691 aa
MFNANPQTHFSLTINDFKHDLQVLSFTGQESISAPFSFDLELVSERPDLDIEGLLHKQAF
LAFNDQGAGIHGQVYRIAQGDSGKRLTRYSLTLVPQLAYLAHRTNQRIFQQQTVPQIIAQ
ILEEHGIRSNAYQFQLGSIYPARDYCVQYNESDLYFIQRLCWEEGIHYHFQHSQQGHVLV
LGDDQTIFPKLGRPTAYVQDSGLVADEPVIKRFNLRFATRTSRTTQRDYDFEKARMTLEA
DYRPATENGQPDLEDYQYPGDFLQRERGKLLSQRALEAHRADYRQAEGKSDQPSLVSGHF
LELSEHPRQEWNDLWLLTSVRHEGLEPQVLEESLPSDTSDRKDDFHQGYRNTFTATPWDV
FYRPQQAYEKPRILGSQTALVTGPKGEEIHCDQHGRVKVQFHWDREGQTDDKSSCWLRVA
SSWAGTSHGAVTIPRVGMEVLVSFLEGNPDSPLISGCLSNSANPVPYELPAHKTRSVFRS
RSSPDSTGFNELHLEDRSGQELIYLRAQRDMEQKVENDSRLEVGNERKETIKGNSIAVLE
AEDHRTVSADRKVQLKANDYLLVGSSSHTRVGQTLVAEAGQEVHLKAGANLILDAGASIT
LKAGGQHIVIGPGGIFSSTDIQIGGAPVGGTAANPILPGALTALMAPPAIPPMIAPSQDA
LMAVSRVKSPDFCPICEACKNGLCLTEGATA
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgttcaacgcaaatccgcagacgcatttcagcctgaccatcaacgacttcaagcacgac
cttcaggtcctttcgttcactggccaagagtccatcagcgcccccttttcctttgatctg
gagctggtcagcgaacggcccgatctggacatcgaaggcctcttgcacaagcaagccttt
ctggcctttaacgaccaaggcgctggtattcatggacaggtctaccgcattgcgcaaggt
gactcaggtaagcgattgacccgctacagccttaccctggtcccgcagttagcctatctg
gcacaccgaaccaaccaacgaatattccagcagcaaaccgtcccgcagatcatcgcgcag
attcttgaagaacacggcatccgcagcaacgcctaccagtttcagttggggtcgatctac
ccagcgcgggactactgcgtccagtacaacgaatctgacctctacttcattcagcgcctg
tgctgggaagaaggcatccattaccactttcaacattcgcaacaaggtcacgtactggta
ttgggtgacgaccagacgatattccccaagctgggcaggccgacagcctatgtgcaggac
agtggtctggttgccgatgaacctgtgatcaaacgttttaacctgcgctttgcgacccgc
accagtcgaaccacgcaacgcgattacgactttgagaaagcccgcatgacgctggaggcc
gactatcgcccagcgaccgaaaacgggcagcctgatctggaggactaccaataccccggc
gatttccttcagcgcgaacggggcaagctattgagccaacgggctctggaagcccatcgt
gcagactaccgtcaggccgaaggtaaaagtgatcaaccctcactggtcagcggtcacttt
ctggaactgtccgaacacccacgccaggagtggaatgacctctggttgctgacctcggtt
cgccacgaaggcttggaacctcaagtgctggaagaaagcctccccagtgacaccagcgac
cgcaaggacgacttccatcagggttaccgcaatacctttaccgcgacaccctgggacgtg
ttctatcgcccacaacaggcctatgagaaacctcggatactcggcagtcagactgcgttg
gtcaccggccccaaaggcgaggaaatccactgtgaccagcacgggagggtcaaggtacag
ttccattgggaccgagaaggtcagaccgatgataaaagcagttgctggctacgggtcgcc
tccagttgggcaggaaccagccacggcgcggtgaccatccctcgggtcggcatggaggta
ctggtttcattcttggagggtaaccccgattcccccctgatcagtggttgtctcagcaac
agcgctaaccctgtcccttacgagctacccgcccacaagacccgcagcgtctttcgcagt
cgcagttcacccgacagcacaggcttcaatgaattgcatctggaagaccgtagcggccag
gagctgatctacctgcgggctcaacgcgatatggagcagaaggtcgaaaatgacagtcgg
ctggaagtcggtaacgaacgcaaagaaaccatcaagggcaacagcattgccgtattggaa
gccgaagaccaccgcactgtcagcgctgaccgcaaagtccaactcaaggccaacgactat
ttgttggtaggcagcagcagccatacccgcgtaggccaaacgctggtcgccgaagccggg
caggaggtccaccttaaagccggagccaacctgattctggatgcaggcgccagcattacc
ttgaaggccggtggtcaacacatcgtgattggccctggtgggatcttcagcagtactgat
attcaaatcggtggcgccccggtaggaggcacagcagctaatccaatattgccaggggca
ctgacagccctaatggcccctccagcaatcccgccgatgattgccccgtcccaggatgcc
ctgatggccgtctccagggtgaaaagccctgacttctgtccgatctgtgaggcctgcaaa
aatggtctttgcctgactgaaggagccacggcatga

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