Pseudomonas chlororaphis subsp. aurantiaca: JM49_26705
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Entry
JM49_26705 CDS
T03338
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_26705
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JM49_26705
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
DUF6528
Motif
Other DBs
NCBI-ProteinID:
AIS15130
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All DBs
Position
5833586..5834248
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AA seq
220 aa
AA seq
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MTLEVPAHAGPQTAKPASRIRQKNEEAIIKAAEDEFARHGFKGTSMNTIAQNAGLPKANL
HYYFTNKLGLYVAVLSNILELWDSTFNTLTAEDDPAEALSRYIRAKMEFSRRQPQASRIF
AMEIISGGECLSEYFSQDYRAWFQGRAAVFQAWIDAGKMDPVDPVHLIFLLWGSTQHYAD
FATQICRVTGRSKLTKQDMEDAGNNLIRIILKGCGLKPAL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgaagtcccagcccacgccggccctcaaaccgccaagcccgccagccgcatt
cgccagaaaaacgaagaagcgatcatcaaggccgccgaagacgagttcgcccgtcacggt
ttcaaaggcaccagcatgaacaccatcgcgcagaatgccggcctgcccaaggccaacctg
cactactacttcaccaacaagcttgggctgtatgtcgcggtgttgagcaacatcctcgag
ctgtgggacagcaccttcaacaccctgaccgccgaggacgacccggccgaagcgctgagc
cgctacatccgcgccaagatggagttctcccggcgccagccgcaggcctcgcggatcttc
gccatggagatcatcagcggcggcgaatgcctcagcgaatacttcagccaggactaccgc
gcctggttccaggggcgcgccgcggtgttccaggcctggatcgacgccggcaagatggac
ccggtggacccggtgcacctgatcttcctgctgtggggcagcacccagcattacgccgac
ttcgccacccagatctgccgcgtcaccggtcgcagcaagttgaccaagcaggacatggaa
gacgccggcaacaacctgatccgcatcatcctcaagggttgcggcctcaagcctgcctta
taa
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integrated database retrieval system
