Pseudomonas chlororaphis subsp. aurantiaca: JM49_28140
Help
Entry
JM49_28140 CDS
T03338
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JM49_28140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_28140
Enzymes [BR:
pcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JM49_28140
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JM49_28140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
zinc-ribbons_6
AAA_30
HypA
AAA_16
AAA_19
nSTAND3
TrwB_AAD_bind
PIF1
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
AIS15411
LinkDB
All DBs
Position
6166541..6168760
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRTQLHPGMRLRVPFGRREMIGILVEVTDSSEVP
AEKLKPALALLDATPPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARQER
FWSVSPGASLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKDLVQ
VEIRRHAPGERHEHWLAQPELPLNSEQRAAYEAIRSGFDSYHAFLLAGVTGSGKTEVYLQ
LIRETLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSMESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRYGELRCHHCGHSERVPRHC
PKCGKVDLRPVGAGTERAEERLAILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAQMNLGGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHKLLSHWLLVLEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgcctcgccctgccttcgcccctgcgccgcctgttcgattac
cgggcccctgccggcgtactgcgtacccagttgcatcccggcatgcgcctgcgagtgcca
ttcggtcgccgggagatgatcggcatcctggtcgaggtcacggacagcagcgaagtcccc
gccgagaaactcaagccggccttggccctgctggacgccaccccgccgctgccgcctgcg
ctgttcaagctgtgcctgtggaccgcgcagtattaccagcacagcctcggcgataccctg
agctgggcgctgccggtcctgctgcgccagggcgagccagccgaggcccggcaggaacgc
ttctggtcggtcagccccggcgccagcctcgacgacccacgcatcgcccgcgccccgcgc
cagcgcgaagccctggcgaccctggcccagcatcctcacggcgtcgcccaccagttgctg
agcaagctgatgctgagcaaggacagcctggacctgttgctggccaaggacctggtgcag
gtggaaatccgccggcacgccccgggcgaacgccacgaacattggctggcccagccggag
ctgccactcaacagcgaacagcgcgccgcatacgaggctatccgctccggtttcgacagt
tatcacgccttcctgctggccggggtcaccggtagcggcaagaccgaagtctatctgcag
ctgatccgcgaaaccctggaagccggcaagcaggcactggtgctgatcccggagatcaac
ctcgggccgcagaccctggcgcgcttcgagcaacgcttcaacgcgcgcatcgccctgctg
cactctgcggtcaacgaccgtgagcgcctggatgcctggctggcggcccgcgacggcgag
gccgacattattatcggcacccgctcggcgctgttcacgccgatgaagaaccccgggctg
atcatcatcgatgaagagcacgacggctcctataaacagcaggaaggcctgcgctaccat
gcccgcgacctggccctggtccgcgcccgccaggaaaacatccccatcgtgctgggctcc
gccaccccgtcgatggaaagcctgcacaacgcctacaccggccgctatggcctgctgcgc
ctgaacgaacgggctggcggcgccaagcagccacgtttcctgcgcctggacgtgaagagc
cggccgctggacagcggcatttccggccccatgcaacaagccatcggccagaccctggcg
gcaggccagcaggtgctggtgttcctcaaccgccgcggcttcgcgccgaccctgctgtgc
catgactgcggctggatgtccgagtgcgaacgctgcgatgcgcggatgaccgtgcaccag
cgctatggcgagctgcgctgccaccattgcggccactccgagcgcgtgccgcggcattgc
ccgaaatgcggcaaggtcgacctgcgcccggtcggcgccggcaccgagcgcgccgaagag
cggctggcgatcctgttcccggactacccggtcctgcgggtcgaccgcgacagcacctcg
cgcaaggacgcgatgaaccagttgttcgccaccatccagaagggccaaccctgcatcctc
gtcggcacccagatgctcgccaaggggcaccattttccgcgggtgaccctggtctcgatc
ctcgatgccgacggcggcctgttctccggcgacttccgcgccagtgaacgcatggcgcag
ctgatcgtccaggtggctggccgggccggccgggccgaggagccgggcaaggtgatcatc
cagacccacctggccgaccacccgctgctggtgcagctgaccgaacagggttacttcgcc
tttgccgaacaggccttgagcgaacgccgcgccgccggcctgccgccgttcgcccatctg
gccctgctgcgcgccgaggcgcacaagccagggcaggccgaaggcttcctcgacgaagcc
tgcagcgaagccgagcgtttgctggcccagatgaacctgggcggtatcgagttgctgggg
ccggtgccggcgcccatggagcgccgcgccgggcgttatcgcgcacaactgctgttacag
gccaacgcccgggcaccgctgcacaagctgctgagtcactggctgctggtcctggaacag
atgcccagcgggcgccaggtacgctggtcgctggatgttgaccctgtagacctgtattga
DBGET
integrated database retrieval system
