Pseudomonas chlororaphis subsp. aurantiaca: JM49_29735
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Entry
JM49_29735 CDS
T03338
Name
(GenBank) glycosyl hydrolase
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
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Paralog
GFIT
Motif
Pfam:
Big_12
DUF4347
Motif
Other DBs
NCBI-ProteinID:
AIS15718
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All DBs
Position
complement(6505930..6512613)
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AA seq
2227 aa
AA seq
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MWWSKGKSRVNQRATGRASALASPMIMPLEPRMLFDGAVAATVAEAVQPDSHTTTDVAKT
PTAADQPSVSKDTHGQADAPAAATSVAVPGQTVVFVDSRVKDADSLLQGLAPGTQVVQLG
ANRDGLQQIADYLDQHQGVSSVQIIAHGNAGDLWLGNSYLSADNVQARSAVLADIGQDMN
AGGDILIYGCYTAEGERGLSFVDSLAQLTGRDVAASSDRTGVGGDWELEIATGTIESANV
LSTQAMQDYQWGLATWTATNNANTGVGSLRAALASAQNGDIVTFSSGMTVQLTSELLVNK
NVTIDGDLNNDGAADVILDGQYRTRVIEVASGSTVTLDGLVITRGLVSGNGGNGGYGATG
AMAGGIFNAGNLTLNNVTVTSNAASGGGGGGGVTGAFYGGGGGGGGGLGGQGGGHGGSAG
PGTGTLGGQAGSAGVGGYGGGYDATHMGGRGGSSTGGAGGVGVSYYSNGGNGATATNGTI
SIGGGGGGAGWDKVGGAGGNAAGGIYNASSGTLTVIGTSTISNNIGAGGGGGGGGGQGSN
ASNGGIGGRGVGAVWNKGTFLITAANFAALSGNAAASGAGGVALGGGTTGTSPTSFSTIY
NDGGILNTAYAPPPTATIVVADTTLSIGETSLVTITFSEAVTGFTNADLTVANGTLTAVS
SSDGGITWTATFTPTSSITDTSNVITLDNTGVINGLGTAGVGTTNSNNYVVDTVRPTATI
VVADNALRVGETSLVTITFSEAVSGFTNADLTIANGTLTAVSSSDGGITWTGTFTPSASI
TDTTNLITLDNTGIADLAGNAGSGTTDSNNYAIDTVRPTATIVVADSTLTAGETSLVTIT
FSEAVSGFTNADLSIANGTLTTVSSSDGGITWTATFTPTDGISDASNLITLNNTGISDLA
GNAGSGTTDSGNYVINTAHPTATIVVADNALRIGETSLVTITFSEAVTGFTNADLTIANG
TLTAVSSSDGGITWTATFTPTSSITDTSNVITLDNTGVQNAVGNLGVGTTNSNNYAIDTV
RPTATIVVADSALRIGETSLVTITFSEAVTGFTNADLSIANGTLTAVSSSDGGITWTATF
TPTVGINDASNLITLNNTGIADLAGNAGSGTTNSNNYSIDTVLPTATIVVADNALKIGET
SLVTITFSEAVTGFTNADLTIANGTLSAVSSSDGGITWTATFTPTSSITDTSNVITLDNS
GVTNASGNAGSGTTDSNNYAIDTVRPTATIVVADTALRIGETSLVTITFSEAVSGFTNAD
LTIANGTLTAVSSSDGGVTWTATFTPSASIGDSSNLITLNNTGIADLAGNAGSGTTDSNN
YAIDTVRPIATIVVADSALSAGETSLVTITFNEAVSGFTNADLTIANGTLTAVSSSDGGI
TWTATFTPTVGINDASNLITLNNTGVTDLAGNTGSGTTDSNNYAIDSLRPNATIVLSDST
LKAGETAVVTITFSEAVTGFDNSDLSIANGTLSAVSSSDGGITWTATFTPTAGITDLSNL
ITLNNAGTTDVAGNSGAGTTNSANYSIETVVPTATIVIADTALKAGETSLVTITFSEAVS
GFDNSDLSIANGTLSAVSSSDGGVTWTATFTPTVGITDTSNVITLNNSGVINVSGNTGSG
TTDSNNYVIDTARPTATIVVANPILPIGETSLVTITFSEAVSGFDNSDLTVSNGTLSAVS
SSDGGITWTATFTPNVNVSDATNLITLNNSGVSDAAGNAGSGSTDSNNFIIDTGRPTATI
VLADTALKAGETTTVTITFSEAISGFTNSDLTVANGTLGALSSSDGGVTWTATFTPAINI
SDSSNQITLNNAGVIDAVGNTGSGTTDSANYVIDTVRPTATIVVANPMLAAGDASLVTIT
FSKAVSGFDNSDLTVANGTLSAVSSSDGGITWTATFTPNTDVSDTSNLITLNGSGVTDGS
GNAGLGSTDSNNYLIDTQRPTATIVVANSSLGVGQTSSVTITFSEAVSGFTNSDLTVANG
TLSALGSSDGGRTWTATLTPTANISDTSNLITLNNSGVSDAFGNTGTGSTDSNNYAINTV
PPANPATELPVGDPEFRSSDPVVPPLPPYVPLQPTLATPPVGDLGSPLAFAPLFEQRVLG
DGIRPLGDIFINHGALAPSFIAQVFGSSDPGGDGNGHGFLGFGGGDGGVFSQSTLSVLFG
QDSTEDGGSLKSFGDKPKAGDLSQGGRGVFGAPSLTQQLQVMQDMEQRPIRDLAKAFEQA
GISAMQA
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggagcaaaggcaagtcgcgggtcaatcagcgggccaccgggcgggcgagtgcc
ctggcctcaccgatgatcatgcccctggagccgcgcatgctgttcgacggcgcggtggcg
gcgacggtggccgaggccgtccagccggacagccacaccaccacggacgtggccaagacg
ccgaccgccgccgatcagccgagcgtcagcaaggacacccacggccaggccgatgcgcca
gctgccgccacttcggtggcggtcccggggcagaccgtggtgttcgtcgattcccgagtc
aaggacgccgacagcctgctccagggcctggcgcccggcacccaggtggtgcaactgggg
gcgaaccgggatggcctgcagcagatcgccgattacctggaccagcatcagggtgtcagt
tcggtgcagatcatcgcccacggcaatgccggggacctgtggctgggcaacagctacctc
tcggctgacaacgtccaggcccgcagcgcagtgctggcggacatcggccaggacatgaac
gccggcggcgatatcctgatctacggctgctacaccgccgagggcgagcgcggcctgagt
tttgtcgattcgctggcgcagctcaccggtcgcgacgtggccgcctccagcgatcgcacc
ggcgtgggtggcgactgggaactggagatcgccaccggcaccatcgaaagcgccaatgtg
ctgtccacccaggccatgcaggattatcaatgggggctggcgacctggaccgccaccaac
aacgccaacaccggcgtgggttcgttgcgggcggcgctggcgtcggcgcagaacggcgac
atcgtcaccttcagcagcggcatgacggtgcagctgacctccgaactgctggtcaacaag
aacgtgaccatcgacggcgacctgaacaacgacggcgcggcggacgtgatcctcgacggc
cagtaccgcacccgggtcatcgaagtggcctcgggcagtaccgtgaccctggatggcctg
gtgatcacccggggcctggtctcgggcaacggcggtaatggcgggtatggtgcgaccggc
gccatggccggggggattttcaacgccggcaacctcaccctcaacaacgtcaccgtgacc
tccaacgcggcttcgggcggcggtggcggcggcggtgtcaccggcgcgttctacggcggt
ggcggtggtggtggcggcgggctgggtggccagggcggcggccacggcggttccgccggc
cccggcaccggcaccctgggcggccaggctggcagtgctggcgtgggtggttatggcggt
ggctacgacgccacccacatgggcggtcgcggcggttccagcaccggcggcgcaggcggt
gtgggggtgtcctactacagcaacggcggcaacggcgccacggccaccaacggcacgatt
tccatcggtggcggtggcggcggcgcgggttgggacaaggtcggcggcgcgggcggcaat
gccgccggcggtatctacaacgcctccagtggcaccctcaccgtgatcggcacctcgacc
atcagcaacaacatcggcgcgggcggtggcggcggcggtggtggcggccaaggcagcaac
gccagcaacggcgggatcggcggccggggtgtcggcgcggtctggaacaagggcaccttc
ctgatcaccgcggccaactttgccgccctgagcggcaacgcggcggccagtggcgccggc
ggcgtggcactgggaggtggcaccaccggtacttcaccgacttctttctcgaccatctac
aacgacggcggcatcctcaacaccgcctatgcaccaccgcccaccgcgaccatagtggtg
gcggataccacattgagcatcggcgagacttcgctggtgaccatcactttctccgaggca
gtgaccggcttcaccaatgccgacctgaccgtcgccaacggtacgctgaccgcggtgagc
agcagcgatggcggcatcacctggaccgccaccttcaccccgacgtcgagcatcaccgat
accagcaacgtgatcaccctggataacaccggggtgatcaatggccttggcaccgccggg
gtcggcaccaccaactccaacaactacgtggtcgataccgtacggccgaccgcgaccatc
gtggtcgcggacaatgccttgcgagtcggtgaaacctcgctggtgaccatcaccttcagc
gaagcggtgagcggtttcaccaatgccgacctgaccattgccaacggcacgctgactgcg
gtgagtagcagcgatggcggtatcacctggaccggcacctttaccccgagcgccagcatt
accgataccaccaacctgatcaccctggacaacaccggcatcgccgacctggccggcaac
gccggcagcggcaccaccgattccaacaattatgcgatcgataccgtccgcccgacggcg
accatcgtggtcgccgacagcaccctcacggcgggcgaaacgtccctggtgaccatcacc
ttcagcgaggcggtcagtggcttcaccaacgccgacctgagcatcgccaacggcaccctg
actacggtgagcagcagcgatggcggcatcacctggaccgcgaccttcaccccgaccgat
ggcatcagcgacgccagcaacctgatcaccctgaacaacaccgggatcagcgacctggcc
ggaaatgctggcagcggcaccacggattcgggcaactacgtgatcaacaccgcgcatccg
acggccaccatcgtggtcgccgacaatgccttgaggatcggtgaaacctcgctggtgacc
atcaccttctccgaggcggtaaccgggttcaccaatgccgacctgaccatcgccaacggc
accctgaccgcagtgagcagcagtgacggcggcatcacctggaccgcgactttcaccccg
acgtcgagcattaccgataccagcaacgtcattaccctggacaacaccggcgtacagaac
gccgtgggcaacctgggcgtgggcaccaccaactcgaacaattacgccatcgatacggtg
cggccgaccgcgactatcgtggtcgccgacagcgcgctgagaatcggcgagacctcgctg
gtgaccattactttcagcgaagcggtgacgggtttcaccaacgccgacctgagcatcgcc
aacggcaccctgaccgcggtcagcagcagcgacggaggcatcacctggaccgcgactttc
accccgaccgtcggtatcaacgatgccagcaacctgatcaccctgaacaacaccggcatc
gccgacctggccggtaacgccggcagtggcactaccaactccaacaactacagcatcgac
accgtcctgccgaccgcgaccatagtggtggcggacaatgccctgaagatcggtgaaacc
tcactggtgaccatcactttcagcgaagcggtgacgggtttcaccaatgccgacctgacg
attgccaacggcaccctgagcgcggtcagcagcagcgacggcggtatcacctggaccgcc
actttcaccccgacgtcgagcatcactgacaccagcaacgtcatcaccctggataacagc
ggggtgaccaacgcctccggcaacgctggcagcggcaccaccgactccaacaactacgcc
atcgatacggtgcggccgaccgcgaccatcgtggtcgccgataccgcgttgagaatcggt
gaaacctcgctggtgactatcaccttcagcgaagcggtgagcggcttcaccaacgccgac
ctgaccatcgccaacggcaccctgaccgcagtgagcagcagcgacggtggcgtcacctgg
accgcgaccttcactccgagcgccagcatcggcgacagcagcaacctgatcaccctgaac
aacacgggcatcgccgacctggccggcaacgccggtagcggcaccaccgattccaacaat
tacgccatcgatacggtgcggccgatcgcgactatcgtggtcgccgacagcgccctcagc
gccggtgaaacctcgttggtgaccattaccttcaacgaagcggtgagcggcttcaccaac
gccgacctgaccatcgccaacggcaccctgaccgcggtcagcagcagcgacggcggcatc
acctggaccgcgactttcaccccgaccgtcggtatcaacgatgccagcaacctgatcacc
ttgaacaacaccggagtcaccgacctggccggcaacaccggcagcggcaccaccgactcc
aacaactacgccatcgacagcctgcgtccgaatgccaccatcgttctctccgactcgacc
ctcaaggccggcgaaaccgcggtggtgaccatcaccttcagtgaagcagtgaccggtttc
gacaacagcgacctgagcatcgccaacggcaccttgagtgcggtcagcagcagcgacggc
ggtatcacctggaccgccaccttcaccccgacggcgggcatcaccgacctgagcaacctg
atcactctgaacaacgccggcaccaccgacgtggccggcaacagcggtgcggggaccacc
aactcagccaactacagcatcgaaaccgtggtgccgaccgccaccatcgtgatcgccgac
acggccttgaaggccggcgaaacctcgctggtgaccattaccttcagcgaggcggtcagt
ggtttcgacaacagcgacctgagcatcgccaacggcaccttgagtgcggtcagcagcagc
gacggcggtgtcacctggaccgccactttcaccccgacagtcggtatcaccgataccagc
aacgtcatcaccctgaacaacagcggcgtgatcaatgtctcggggaatacgggcagcggc
accaccgattcgaacaactacgtcatcgacacggcgcgcccgacggcgaccatagtggta
gccaacccgatcctgccgatcggcgaaaccagcctggtgaccatcaccttcagcgaggcg
gtcagcggtttcgacaacagcgacctgacagtgagcaacggcaccctgagcgcggtcagc
agcagcgacggcggcatcacctggaccgcgaccttcaccccgaacgtcaacgtcagcgat
gccaccaacctgatcaccctcaacaacagcggggtcagtgatgcggcgggcaacgccggc
agcggcagcaccgactcgaacaacttcatcatcgacaccgggcggccgaccgccaccatc
gtgttggccgacacggccctgaaagcgggcgaaaccaccacggtcactatcaccttcagc
gaggcgatcagtggcttcaccaactcggacctgacggtggccaacggtaccctgggggcg
ctgagcagcagcgatggcggggttacctggaccgccacctttaccccggccatcaacatc
agcgacagcagcaatcagatcaccctgaacaacgcaggagtgatagacgccgtcggcaac
accggcagcggcaccaccgactcggccaactacgtcatcgacaccgtgcgtcccaccgcg
accatagtggtcgccaacccgatgctggcggcgggcgacgcgtcgctggtgaccatcacc
ttcagcaaggcggtcagcggtttcgacaacagcgacctgacggtggccaacggcaccttg
agtgcggtcagcagcagcgatggcggcatcacctggaccgcgaccttcacgccgaacacc
gacgtcagcgatacgagcaacctgatcaccctcaacggcagtggcgtgacggacggctcg
ggcaatgccgggctgggcagcacggattcgaacaattacctgatcgacacccagcggccg
accgcgactatcgtggtcgccaacagcagcctcggcgtgggccagaccagcagcgtgacc
attactttcagcgaagcggtgagcggcttcaccaactcggacctgacagtggccaacggc
accctgagcgccctgggcagcagcgacggcggccggacctggaccgcaaccctgacgcca
accgccaacatcagcgataccagcaacctgatcaccctgaacaacagcggggtgagcgac
gcattcggcaataccggcactggcagcaccgactccaacaactacgcgatcaataccgtg
ccgccggccaacccagccacggagctgccggtgggcgatccggaattccgttcgagcgac
ccggtggttccgccgctgccgccttatgtgccgctgcaacccaccctcgccacgccaccc
gttggcgacctgggttcgccactggccttcgcaccactgttcgagcagcgggtgctgggc
gatggcatccggccgctgggggacattttcatcaatcacggggccctggcgccgagcttc
attgcccaggtatttggcagcagcgatcccggtggcgacggtaatggccatggtttcctc
ggcttcggtggcggcgatggcggggtgttcagccaaagcacgctgtcggtgctgttcggc
caggactccaccgaggatggcggttcgctgaagtccttcggcgacaagcccaaggccggc
gatctttcccagggcgggcgcggagtgttcggggcaccgtcgctgacccagcaattgcaa
gtgatgcaagacatggagcaacggccgatccgcgatctggccaaggcgttcgagcaggcc
ggcatcagcgcaatgcaggcctga
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