Pseudomonas chlororaphis subsp. aurantiaca: JM49_30105
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Entry
JM49_30105 CDS
T03338
Name
(GenBank) diguanylate phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
JM49_30105
Enzymes [BR:
pcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
JM49_30105
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GFIT
Motif
Pfam:
EAL
CSS-motif
Ddi2_HDD
Motif
Other DBs
NCBI-ProteinID:
AIS15785
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Position
complement(6612956..6614575)
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AA seq
539 aa
AA seq
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MLAAREPLRSWFYRPWLLATCAAVLSAVLLLAASLGIAMHEAQLRESEQMNAQGQRFLER
LEQLFGQLREGLDVLEAQPLRECSPEMVATLQQISFSYRFIYEAAYIDAAQACTNWPRQD
NLAVMRPPDISGPTYKYWLNTSTEPNENRAALMLGRGNFRVATSRGHLTDMVDLPANSSL
MVVLDHGLRAIPVLGPALEWPPTEPWPPTGRSPLLVTQDRLIYRMPTRNPEYQLVLVTPR
TNMQREMFEGWWWLLPSSLALAIFIGGLAFQLAGHRQSLGAELQGALRRGELQVLYQPIF
DLRTRQCVGAEALLRWRRPDGTLTSPELFIPMAENTGQIRPITDFVLQRLLEQLGHLLRA
NPQLYISVNLAACDVMVPRIGKVMARLLALHRVAARQIAFEVTERGLIDVVVARHNLQAL
RDVGHQVLIDDFGTGYCSLAYLQTLPVDYLKIDKAFIDALGHDAASSGVAPHIIRMAHAL
ELKVIAEGIEFEDQALLLSSEGVRFGQGWLFAHALSAVQFIDLITRGRRLGSRRRDDEV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgcccgcgaacccctgcgcagttggttctatcgcccctggctgttggcgacg
tgcgcggctgtattgagtgcggtcttgctgctggcggcgagcctgggcattgcgatgcac
gaggcgcaactgcgcgaaagcgagcagatgaatgcccagggccagcgctttctcgaacgc
ctggagcaactgttcggccagctccgcgaaggcctggacgtgctcgaggcgcagcccctg
cgcgaatgcagccccgagatggtcgcgaccctgcaacagatcagcttcagttatcgcttc
atttatgaagcggcctacatcgatgctgcccaggcctgcaccaactggccacgccaggac
aacctggccgtgatgcggccgccggatatcagcggcccgacctacaagtactggctgaac
acctccaccgaacccaacgaaaaccgtgcggcgctgatgctcgggcgcggcaactttcgc
gtggcgacgtctcgcgggcatctgaccgatatggtcgatctgcccgccaacagcagcctg
atggtggttctcgaccatggcttgcgggccatcccggtgctggggccggcgctggaatgg
ccgccgaccgaaccgtggccgccgacggggcgcagcccgttgctggtgacccaggaccgg
ttgatctaccggatgcccacccgcaatccggagtatcagctggtactcgtcaccccccgc
accaacatgcagcgagaaatgttcgaggggtggtggtggctgctgcccagcagcctggcg
ctggcgatcttcatcggcggcctggcctttcagctggccgggcatcgccagtccctgggc
gccgaattgcaaggggcgctgcgccgtggcgagctgcaggtgctgtatcagcccatcttc
gatctgcgaacgcgccagtgtgtcggcgccgaggccctgctgcgctggcgccgtccggac
ggcaccctgaccagtccggagctgttcattcccatggcggagaacaccgggcagatccgc
cccatcaccgattttgtcctgcaacgcctgctcgagcagttggggcatctgttgcgggcc
aatccgcagctgtacatctcggtcaacctggcagcctgcgatgtcatggtgccgcggatc
ggcaaggtgatggcgcgcctgttggcgctgcatcgggtggcggcgcggcagatcgccttc
gaagtcaccgagcgcgggctgatcgatgtggtggtcgcccggcataacctgcaagccttg
cgggacgttggccatcaggtgctgatcgacgacttcggcacggggtattgcagcctggcc
tacctgcagaccctgccggtggattacctgaagatcgacaaggcattcatcgatgccctg
gggcacgacgccgccagcagcggtgtcgccccgcacatcattcgcatggcccatgccctg
gagctcaaggtgattgccgagggcatcgagttcgaggatcaagcgttgctgctgagcagc
gagggcgtgcgttttggccagggctggctgtttgcccatgcgctgagcgcagtgcagttc
atcgacctgattacccgcggacgccgcctgggctcgcggcgtcgggacgacgaggtctag
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