Pseudomonas chlororaphis subsp. aurantiaca: JM49_30145
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Entry
JM49_30145 CDS
T03338
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp03030
DNA replication
pcp03410
Base excision repair
pcp03420
Nucleotide excision repair
pcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JM49_30145
03410 Base excision repair
JM49_30145
03420 Nucleotide excision repair
JM49_30145
03440 Homologous recombination
JM49_30145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcp03032
]
JM49_30145
03400 DNA repair and recombination proteins [BR:
pcp03400
]
JM49_30145
Enzymes [BR:
pcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JM49_30145
DNA replication proteins [BR:
pcp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JM49_30145
DNA repair and recombination proteins [BR:
pcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JM49_30145
NER (nucleotide excision repair)
GGR (global genome repair) factors
JM49_30145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AIS15793
LinkDB
All DBs
Position
complement(6621599..6624403)
Genome browser
AA seq
934 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAQYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLNELYAQLDIVPSLPIRGAKTLPAKLAEHKEM
AFLSYQLATIKVDVPLDIGLDDLHLGEPDRDKLLELYSLLEFKSWLDELQRDAKRLELSV
AASEPVADLLTQVEVEIEVPVVVEAQYETILDQARFDVWLEKLKNAKLFAFDTETTGIDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGAPEQLDRDTVLRALKPILEDPNKLKVGQHAKF
DMNILANCAIGGDQANGITVRGVAFDTMLESYVLNSTATRHDMDSLAEKYLGHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQVLHEKLAAIPSLASVLSDIEMPVVP
VLARIERQGALVDADLLRVQSIELGDKMVELEREAFEIAGEEFNLGSPKQLGVILYDKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGR
IHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGYKLLAADYSQIELRIM
AHLSRDEGLLNAFRNNLDVHTATAAEVFKVELKDVSSDQRRSAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAAEQGYVETLFGRRLYLPEINSNKPQ
ERAGAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVREDLVD
QVSEEIRGHMSKAATLDVPLLVEVGVGSNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtaccgcgccttccac
gcgctgccacctttgaccacttccaaaggcatgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagtccgttcgccgtggtgttcgac
gccaagggcgggaccttccgcgatgacatgtacgcccagtacaaggccaatcgcccgagc
atgcccgacgacatgcgggtgcagatcgagccgttgcacgccagcgtgatcgccctgggc
tttccgctgctgtgcgtcgagggcgtcgaggcggacgacgtgatcggcaccctggcccgc
agcagcgcggcggctgaccggccggtggtgatctccactggcgacaaggacatggcgcaa
ctggtggacgggcacattacgctggtcaacaccatgtccggtagcagcatggacgtggag
ggcgtgaaggagaaattcggcgtcgctcccgagcagatcatcgactacctggcgctgatg
ggcgactcctccgacaacatccccggtgtgccgggcatcggcccgaagaccgcttccggc
ctgttggtgggggtcaacggtggcctgaacgagctgtatgcacagctcgatatcgtcccg
agcctgccgattcgtggggccaagaccctgccggccaagctcgcagagcacaaggagatg
gctttcctctcctatcagttggcgaccatcaaggttgatgtgccgctggatatcggcctg
gacgacctgcacctgggcgaaccggaccgcgacaaactgctcgagctgtacagcctgctg
gagttcaagagctggctcgacgagctgcagcgcgatgccaagcgcctggagctgagtgtc
gccgcctctgagccggtggccgacttgttgactcaggtcgaagtcgagatcgaagtgccg
gtggttgtcgaagcgcagtacgaaaccatcctcgatcaggcgcgtttcgatgtctggctg
gagaaactgaagaacgccaagctgttcgccttcgataccgaaaccaccggcatcgacgcc
cagcaggcgcagctcgtggggctgtccttcgccgtgcaggccaacgaagcggcttatatt
ccgctgacccactcttatatcggcgcgccggagcagctggatcgcgacaccgtcctgcgg
gccctgaagccgattctcgaagatccgaacaagcttaaggtcggccagcacgccaagttc
gacatgaacatcctggccaactgcgccatcggcggtgatcaggccaatggcatcacggtg
cgcggggtcgccttcgacaccatgctcgagtcctatgtgctcaattccacggctacccga
cacgacatggacagcctggcggagaaatacctgggccacaccaccgtgagcttccaggac
atcgccggcaagggcgccaagcagctgacgttcgaccagatcgccctcgagcaggccggg
ccttatgccgccgaggacgccgatgtgaccctgcgtctgcatcaggtcctgcatgaaaaa
ctggccgcgatcccgagcctggccagcgtgctcagcgatatcgaaatgcccgtggtgccg
gtgctggcgcggatcgagcgccagggggcgctggtggatgccgacctgctgcgtgtgcag
agcatcgaactcggtgacaagatggtggagctggagcgtgaagccttcgagatcgccggc
gaagaattcaacctcggctcgcccaagcaactgggggtgattctctatgacaagctcggc
ctgccggtgctgaagaaaaccgccaaaggccagccgtccactgctgaagaagtgctggcc
aagctggccgaggacgactacccgctgcccaaggtgctgatgcagtaccgctccatgagc
aagctcaagagcacctacaccgaccgcctgccggagcagatcaacccgcgtaccgggcgg
atccacacctcttaccatcaggcggtcgcgtctaccgggcgtttgtcttccagcgatccg
aacctgcagaacatcccggtgcgcaccgccgaaggccggcgtatccgccaggcctttatc
gcgccgcctggctacaagctgctggcggcggactattcgcagatcgagctgcggatcatg
gcgcacctgtcccgcgacgaagggctgctgaatgccttccgcaataacctcgacgtgcac
acggcaaccgcggccgaagtgttcaaggtcgagctcaaggacgtcagttccgatcagcgc
cgcagtgccaaggcgatcaacttcggcctgatctacggcatgggtgcgcagaagctcggc
aaggacatcggcgtcgataccaagaccgccaaggcctatatcgacacctacttcgcccgc
tatcccggcgtgcgcgaatacatggaccgcacccgcgcccaggctgcggaacagggttat
gtggaaaccctgttcggccgccgcctgtacctgccggagatcaactccaacaagccgcag
gaacgtgctggcgccgaacgtacggcgatcaacgcgccgatgcagggcacggcggccgac
atcatcaagaaggccatggtggcggtggataactggctggcgacctcaggcctggatgcc
aaagtcatcctgcaggtgcacgacgaactggtgctggaagtgcgcgaagacctggtggac
caggtaagcgaggagattcgcggccacatgagcaaggccgcgaccctggatgtgccgctg
ctggtcgaggtcggggtgggcagcaactgggatgaggcgcactga
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