Pseudomonas chlororaphis subsp. aurantiaca: JM49_30425
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Entry
JM49_30425 CDS
T03338
Name
(GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein RimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcp03009
]
JM49_30425
03016 Transfer RNA biogenesis [BR:
pcp03016
]
JM49_30425
Enzymes [BR:
pcp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
JM49_30425
Ribosome biogenesis [BR:
pcp03009
]
Prokaryotic type
Other maturation factors
JM49_30425
Transfer RNA biogenesis [BR:
pcp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JM49_30425
Prokaryotic type
JM49_30425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
AIS15849
LinkDB
All DBs
Position
complement(6675557..6676114)
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AA seq
185 aa
AA seq
DB search
MVSSWRVQQAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKSRSVDKGLILIAD
NIRQFDFLFEDFPQEWLDRMASTWPGPNTWLVPHQNLLPEWVTGVHDTVALRVSDHPLVR
ELCALVGPLISTSANPQGRPAARTRIRVEQYFRGQLDMVLGGNLGGRKNPSLIRDLVTGR
IVRPA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcagttggcgtgtgcaacaagccgcacgagaaattcgcgcaggggcggtgatt
gcctacccaaccgaagcagtctgggggttggggtgcgacccgtggaacgaagaggcggtg
gaccggttgctggccatcaagtcgcgctccgtggacaagggcctgatcctgatcgccgac
aacatccgccagttcgatttcctcttcgaggacttcccccaggaatggctcgatcgcatg
gccagcacctggccaggcccgaatacctggctggtaccccatcagaatctgttgccggaa
tgggtcaccggggtccacgacaccgtggccttgcgggtcagcgatcatccactggtgcgc
gagttgtgcgcgttagtggggccgctgatttccacctcggccaatccccagggtcgcccg
gccgcccgcacgcggattcgcgtcgagcagtatttccgcgggcaactggacatggtcctg
ggcggcaacctgggcgggcgcaagaacccgagcctgatccgcgacctggtgaccggcagg
atcgtgcgtccggcctga
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