Pseudomonas citronellolis: PcP3B5_02470
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Entry
PcP3B5_02470 CDS
T04637
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03420
Nucleotide excision repair
pcq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PcP3B5_02470 (uvrD)
03430 Mismatch repair
PcP3B5_02470 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_02470 (uvrD)
Enzymes [BR:
pcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PcP3B5_02470 (uvrD)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PcP3B5_02470 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PcP3B5_02470 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AMO73760
LinkDB
All DBs
Position
complement(274830..277010)
Genome browser
AA seq
726 aa
AA seq
DB search
MNDDLSLLLNSLNDPQRQAVAAPLGHQRVLAGAGSGKTRVLVHRIAWLIQVEHASPHSIL
AVTFTNKAAAEMRARIEQLLGINPAGMWVGTFHGLAHRLLRAHWREAGLPEGFQILDSDD
QLRLVKRVVRELGLDEQRWPPRQAQWFINAQKDEGNRPQNIQASGDLYLATMVSVYQAYE
EACARAGVVDFAELLLRSLDLWRNDPGLLAHYQRRFRHILVDEFQDTNAVQYAWLRLLAK
GGESLMVVGDDDQSIYGWRGAKIENIQQFADDFAGTEDIRLEQNYRSTATILKAANALIA
NNHGRLGKELWTDGVDGEPITLYAGFNEHDEARYIVETIEDALRKDGLKRSEIAILYRSN
AQSRVLEEALLREKIPYRIYGGQRFFERAEIKNALAYLRLIRLRDDDAALERVVNIPPRG
IGEKTVEAIRNAARLNGTSMWRAINDVIAAKAVTGRAASALNGFLETVDLLAQQVEGMPL
HRMTQTVIEQSGLIGYHKEEKGEKGQARVENLEELVSAARAFENPEDEDIPPLVAFLDHT
ALEAGDTQADAFEDSVQLMTLHSAKGLEFPLVFLAGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQRLVLTYAETRRLYGSETYNKVSRFVREIPPGLIQEVRLSNSVSRPLSGNQ
RSGSLFSGAGVPETPFALGQSVRHPLFGDGVILNFEGSGAQARVQVNFDSEGSKWLMLGY
AKLEAV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgacctctccctcctgctcaactccctcaacgacccgcagcgccaggccgtg
gccgcgccgctgggccaccagcgcgtgctcgccggcgccggctcgggcaagacccgcgtg
ctggtgcaccgcatcgcctggctgatccaggtggagcacgcctcgccccacagcatcctg
gcggtgaccttcaccaacaaggcggcggcggagatgcgcgcgcgcatcgagcagttgctg
gggatcaacccggcgggcatgtgggtcggcaccttccacggcctggcccaccgcctgctg
cgcgcccactggcgcgaggccgggctgcccgagggcttccagatcctcgacagcgacgac
cagctgcgcctggtcaagcgcgtggtgcgcgagctgggcctggacgagcagcgctggccg
ccgcgccaggcgcagtggttcatcaacgcgcagaaggacgagggcaaccgcccacagaac
atccaggccagcggcgacctctacctggccaccatggtcagcgtctaccaggcctacgaa
gaggcctgcgcccgcgccggggtggtcgacttcgccgagctgctgctgcgctcgctggac
ctgtggcgcaacgaccccggcctgctggcgcactaccagcggcgcttccggcacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctggccaag
ggcggcgagagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgcggg
gcgaagatcgagaacatccagcagttcgccgacgacttcgccggcaccgaggacatccgc
ctggagcagaactaccgctccaccgccaccatcctcaaggccgccaacgccctgatcgcc
aacaaccacgggcgcctgggcaaggagctgtggaccgacggggtggatggcgagcccatc
accctctacgccggcttcaacgagcacgacgaggcccgctacatcgtcgagaccatcgag
gacgccctgcgcaaggacggcctcaagcgcagcgaaatcgccatcctctaccgctccaac
gcgcagtcgcgggtgctggaagaggcgctgctgcgggagaagatcccctaccgcatctac
ggcggccagcgcttcttcgagcgcgccgagatcaagaacgccctggcctacctgcggctg
atccgcctgcgcgacgacgacgccgcgctggaacgggtggtcaacatcccgccgcgcggc
atcggcgagaagaccgtcgaagccatccgcaacgccgcgcggctgaacggcacctccatg
tggcgcgcgatcaacgacgtgatcgccgcgaaagccgtgaccggccgcgccgccagcgcg
ctcaacggcttcctcgaaaccgtcgacctgctggcccagcaggtcgagggcatgccgctg
caccggatgacccagacggtcatcgagcagtccgggctgatcggctaccacaaggaagaa
aagggcgagaagggccaggcccgggtggagaacctggaagaactggtcagcgccgcccgc
gccttcgagaaccccgaggacgaggacatcccgccgctggtggccttcctcgaccacacc
gcgctggaggccggcgacacccaggccgacgccttcgaggacagcgtgcagctgatgacc
ctgcacagcgccaagggcctggagttccccctggtgttcctggccggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagagcccggccgcctggaagaggaacgccgcctg
gcctacgtcggcatcacccgcgccatgcagcgcctggtgctgacctacgccgagacgcgc
cgcctgtacggcagcgagacctacaacaaggtctcgcgcttcgtccgcgaaatcccgccg
ggcctgatccaggaagtgcgcctgtccaactcggtgagccggccgctgtccggcaaccag
cgcagcggcagcctgttcagcggcgccggcgtgccggaaacccccttcgccctcggccag
tcggtacgccacccgctgttcggcgacggcgtgatcctcaacttcgaaggctccggcgcc
caggcccgggtgcaggtgaacttcgacagcgaaggcagcaagtggctgatgctcggctac
gccaagctggaggcggtgtag
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