Pseudomonas citronellolis: PcP3B5_04430
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Entry
PcP3B5_04430 CDS
T04637
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PcP3B5_04430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcq03021
]
PcP3B5_04430
03019 Messenger RNA biogenesis [BR:
pcq03019
]
PcP3B5_04430
Transcription machinery [BR:
pcq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PcP3B5_04430
Messenger RNA biogenesis [BR:
pcq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PcP3B5_04430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
AAA_22
Mor
Motif
Other DBs
NCBI-ProteinID:
AMO73952
UniProt:
A0A127MKZ2
LinkDB
All DBs
Position
491051..492313
Genome browser
AA seq
420 aa
AA seq
DB search
MNLTELKQKPITELLEMSDAMGLENMARSRKQDIIFALLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDSIN
FDRPENAKNKILFENLTPLFPTKRLTMEAGNGSTEDLTGRVIDLCSPIGKGQRGLIVAPP
KAGKTIMLQNIAANIARNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALIETGSKMDEVIYEEFKGTGNSELILDRRISEKRVFPAINI
NRSGTRREELLTGEEELQRMWILRKILHPMDEIAAVEFLLDKLKQTKTNDEFFDSMKRSK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgaactcaagcaaaagccgattaccgaattgctggaaatgtccgatgcc
atgggcctggaaaacatggcccgttcgcgcaagcaggacatcatcttcgcgctgctgaag
aagcacgcgaagagcggcgaggaaatctccggtgacggcgtgctggagattctccaggac
ggcttcggcttcctgcgctccgccgactcctcgtacctggccggcccggacgacatctac
gtctcgcccagccagatccgccgcttcaacctgcgcaccggggacaccatcgtcggcaag
attcgcccgccgaaggaaggtgagcgctacttcgccctgctcaaggtcgactcgatcaac
ttcgatcgtccggagaacgcgaagaacaagatcctgttcgagaacctgaccccgctgttc
ccgaccaagcgcctgaccatggaagccggcaacggctccaccgaggacctcaccggccgg
gtgatcgacctctgctcgccgatcggcaagggccagcgcggcctgatcgtcgcaccgccg
aaagcgggcaagaccatcatgctgcagaacatcgcggccaacatcgcccgcaacaatccc
gagtgccacctgatcgtcctgctgatcgacgagcgcccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtcgcctccaccttcgacgaaccgccgacccgccacgtg
caggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
atcatcctgctcgactccatcacccgcctggcgcgtgcctacaataccgtgatccccagc
tccggcaaggtgctcaccggtggtgtcgacgcccacgccctggagaagcccaagcgcttc
ttcggcgccgcgcgcaacatcgaggaaggcggttcgctgaccatcctcgccaccgcgctg
atcgagaccggctcgaagatggacgaggtgatctacgaggaattcaagggtaccggcaac
tcggaactcatcctcgaccgtcgcatctccgagaagcgcgtgttcccggcgatcaacatc
aaccgctcgggcacccgccgcgaagagttgctgaccggcgaggaagagctgcagcgcatg
tggatcctgcgcaagatcctgcacccgatggacgagatcgccgccgtcgagttcctgctg
gacaagctcaagcagaccaagaccaacgacgagttcttcgactcgatgaagcgcagcaag
taa
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