Pseudomonas citronellolis: PcP3B5_06200
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Entry
PcP3B5_06200 CDS
T04637
Symbol
fecI_2
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PcP3B5_06200 (fecI_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcq03021
]
PcP3B5_06200 (fecI_2)
Transcription machinery [BR:
pcq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PcP3B5_06200 (fecI_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
Rv2175c_wHTH
MerR
HTH_17
HTH_24
HTH_29
Sigma70_r3
DUF8651
HTH_11
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AMO74127
UniProt:
A0AAQ1KKF4
LinkDB
All DBs
Position
complement(680856..681374)
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AA seq
172 aa
AA seq
DB search
MSAVQTGNGEFVGALYRDHRDWLLAWLNRSVGCPQRAEDLGQDTFVRILGRRELPSLREP
RAFLVTVAKGLLVDHWRRQALEQAYLDELLQLPEAEQPSVETQFLILADLREIDRLLGKL
SSRARSAFLLNRLDGLGHAEIAERLGVSVPRVRQYIAQGLRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcagtccagactggcaatggcgaattcgtaggcgcgctctaccgcgaccaccgc
gactggctgctcgcctggctcaatcgcagcgtcggctgcccgcagcgcgccgaggacctc
ggccaggacaccttcgtgcgcatcctcggccgccgcgaactgcccagcctgcgcgagccg
cgggccttcctggtgaccgtggccaagggcctgctggtcgaccactggcgccgccaggcg
ctggagcaggcctacctcgacgagctgctgcaactgcccgaggccgagcagccctcggtg
gaaacccagttcctcatcctcgccgacctgcgcgagatcgaccgcctgctgggcaagctg
tccagccgcgcgcgcagcgccttcctgctcaaccgcctggacggcctgggccacgccgag
atcgccgagcgcctgggcgtatcggtgccgcgggtgcgccagtacatcgcccagggcctg
cgccagtgctacatcgccctgtacggcgagccgacatga
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integrated database retrieval system
