Pseudomonas citronellolis: PcP3B5_09030
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Entry
PcP3B5_09030 CDS
T04637
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03030
DNA replication
pcq03430
Mismatch repair
pcq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PcP3B5_09030 (holA)
03430 Mismatch repair
PcP3B5_09030 (holA)
03440 Homologous recombination
PcP3B5_09030 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcq03032
]
PcP3B5_09030 (holA)
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_09030 (holA)
Enzymes [BR:
pcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PcP3B5_09030 (holA)
DNA replication proteins [BR:
pcq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PcP3B5_09030 (holA)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PcP3B5_09030 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AMO74391
UniProt:
A0A127MMQ4
LinkDB
All DBs
Position
complement(958116..959153)
Genome browser
AA seq
345 aa
AA seq
DB search
MKLNPAQLAKHLQGSLAPVYVVSGDEPLLCQEACDAIRAACRQRDFSERQVFNAEANFDW
GLLLEAGASLSLFAEKRLLELRLPSGKPGDKGAAALQEYLQRPPEDTVLLVTLPKLDGAT
QKTKWAKALIDGEAAQFIQIWPVDVHQLPQWIRQRLSQAGLAASQDAVDLIAARVEGNLL
AAAQEIEKLKLLADGNQLDAATVQAAVADSARFDVFGLIDAALAGEAAHSLRMLEGLRGE
GVEPPVILWALAREIRQLAGIAQQFGQGVPLDKAFAQCRPPVWDKRRPLLTRALQRHSGN
RWNQLLQDAQLIDAQIKGQAQGDAWNGLARLALLLAGQRLPLPPG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaatcccgcccaactcgccaagcacctgcagggcagcctggcccccgtctac
gtggtcagcggcgacgaaccgctgctctgccaggaagcctgcgacgccatccgcgccgcc
tgccgccagcgtgatttcagcgaacgccaggtgttcaacgccgaagccaacttcgactgg
ggcctgctgctggaagccggcgccagcctctcgctgttcgccgagaagcgcctgctggag
ctgcgcctgccctccggcaaacccggcgacaagggcgccgccgccctccaggaatacctg
cagcgcccgccggaagacacggtgctgctggtcaccctgcccaagctcgacggcgccacc
cagaagaccaagtgggccaaggcgctgatcgacggcgaggccgcgcagttcatccagatc
tggccggtggacgtgcaccagctgccgcagtggatccgccagcgcctgtcccaggccggc
ctcgccgccagccaggacgcggtggacctgattgccgcgcgggtggaaggcaacctgctg
gccgccgcgcaggaaatcgagaagctcaagctgctggccgacggcaaccagctcgacgcc
gccaccgtacaggcggcggtggccgacagcgcgcgcttcgacgtgttcggcctgatcgac
gcggccctggccggcgaagccgcgcacagcctgcgcatgctcgaaggcctgcgcggcgag
ggcgtggagccgccggtgatcctctgggccctggcccgggaaatccgccagctggccggc
atcgcccagcagttcggccagggcgtgcccctggacaaggccttcgcccaatgccgcccg
ccggtgtgggacaaacgccgccccctgctcacccgcgccctgcagcgccacagcggcaac
cgctggaaccagctgctgcaggacgcccagctgatcgacgcgcagatcaagggccaggcc
cagggcgacgcctggaacggcctggcgcgcctggcgctgctgctggccggccagcgtttg
ccgctgccgccgggctga
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