Pseudomonas citronellolis: PcP3B5_09750
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Entry
PcP3B5_09750 CDS
T04637
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_09750 (phrB)
Enzymes [BR:
pcq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PcP3B5_09750 (phrB)
DNA repair and recombination proteins [BR:
pcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PcP3B5_09750 (phrB)
Prokaryotic type
PcP3B5_09750 (phrB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Acyl-CoA_dh_N
Motif
Other DBs
NCBI-ProteinID:
AMO74459
LinkDB
All DBs
Position
complement(1029990..1031417)
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AA seq
475 aa
AA seq
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MRRQLLWLRSDLRVRDNSALAAAAQAGPVVACYLLSPGQWRAHDDSPNKVDFWLRNLQAL
QRDLARLNIPLLLREADTWSQAPEVLLQLCRSLGITAVQVNEEYGIHESRRDEAVKRRLA
EAGVGFHSHLDQLLFAPGSLLTRGGGYFQVFSQFRKLCYQRLATALPACQPVPPAQAPLE
VDSDPVPRELPGFTPSAALAREFWPAGEKAAGERLAGFAEDGLAHYHERRDRPDLDGTSQ
LSAYLAAGVLSPRQCLHAALANNRGEFESGGPGPVAWINELLWREFYKHILVGFPQVSRG
RAFRAPTEALPWRHAPAELEAWQQGRTGFPIIDAAMRQLLATGWMHNRLRMLTAMFLSKN
LLIDWREGERWFMRHLVDGDLAANNGGWQWSASTGTDAAPYFRLFNPLAQSRRFDPHGRF
LRQWLPELAGLDNESLHEPSRLGLFGAPGYPAPMLDLAASRERVLEAFRNLPGAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccaactgctctggctacgcagcgacctgcgcgtgcgcgacaacagcgccttg
gccgccgccgcgcaggccggcccggtcgtcgcctgctacctgctcagccccggccagtgg
cgcgcccacgacgattcgccgaacaaggtcgacttctggctgcgcaacctgcaggcgctg
caacgcgacctggcgcggctgaacattcccctgctgctgcgtgaagcggacacctggagc
caggcgccggaagtgttgctgcagctgtgccgcagcctgggcatcaccgcggtgcaggtg
aacgaggagtacggcatccacgaaagccgccgcgacgaggcggtgaaacggcgcctggcc
gaggccggcgtgggcttccacagccacctggaccagttgctgttcgcccccggcagcctg
cttacccgcggcggcggctacttccaggtcttcagccagttccgcaagctctgctaccag
cgcctggccactgccctgcccgcctgccagccggtaccgccagcgcaggcgccgctggag
gtggacagcgaccccgtgccccgggaactgcccggcttcacgcccagcgcagccctggcg
cgggagttctggcccgccggggaaaaggccgccggcgaacgcctggccggcttcgccgag
gatggcctggcgcactaccacgaaagacgcgaccgcccggacctcgacggcaccagccaa
ctctccgcctacctggccgccggcgtgctctcgccgcgccagtgcctgcacgcggcactg
gcgaacaaccggggcgaattcgagagcggcggcccgggccccgtggcctggatcaacgaa
ctgctctggcgcgagttctacaagcacatcctggtcggtttcccgcaggtcagccgcggc
cgcgccttccgcgcgccaaccgaggcgctgccctggcgccacgcgccggcggagctggaa
gcctggcagcagggccgcaccggcttcccgatcatcgacgcggcgatgcgccagttgctg
gccaccggctggatgcacaaccgcctgcgcatgctcacggccatgttcctcagcaagaac
ctgctgatcgactggcgcgaaggcgaacgctggttcatgcgccacctggtggacggcgac
ctggcggcgaacaacggcggctggcaatggagcgcctccaccggcaccgacgccgcgccc
tacttccgcctgttcaacccgctggcgcaatcgcgccgcttcgatccccacgggcgtttc
ctgcgccagtggctgccggagctggccggcctggacaacgaaagcctgcacgagccatcg
cgcctgggcctgttcggcgcgcccggctacccggcaccgatgctcgacctggcggcgagc
cgcgagcgggtgctggaggccttccgcaatctgccgggggctgcctag
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