Pseudomonas citronellolis: PcP3B5_12760
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Entry
PcP3B5_12760 CDS
T04637
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PcP3B5_12760 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_12760 (recD)
Enzymes [BR:
pcq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PcP3B5_12760 (recD)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PcP3B5_12760 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
SH3_13
UvrD-helicase
AAA_28
HerA_C
T2SSE
NTPase_1
SLFN-g3_helicase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AMO74752
LinkDB
All DBs
Position
1375435..1377477
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AA seq
680 aa
AA seq
DB search
MTREQLLELLGQWAGRGWLRELDRAFAAFLVEQAPDAEPLLILAAALASHQLGRGHVCLD
LAATLADSRFALSLPPDGELEGTPLTLPGELLDGLDLAAWQAALADPRLVGEGPGATPLV
LAGPRLYLRRYWQYEREVRAGIDQRLARGEALRAALPADALRQALDALFPKQANAPADWQ
KLACALAAGNAFGIVTGGPGTGKTTTVVRLLALLQSLALGGEGGRPLRIRLAAPTGKAAA
RLNESIANAVDRLDLGAFANGEQIRQQVPKEVTTLHRLLGSRPDSRQFRHHPGNPLALDL
LVVDEASMVDLEMMAALLGALPDKARLILLGDKDQLASVEAGAVLGELCSRAREGHYRAA
TRDWLEAVSGEQVDDDLLDAHGQPLDQAVAMLRHSHRFSSASGIGQLAEAVNAGDVAAMR
AVWEQGYADLARLALDARDDRGLRELVVEGGGRYFLDAAARPDVAPPQGYRHYLQVLRDT
RPAPDAAQAEFDAWAGRVLAAHGQFQVLCALRRGPWGVDGLNLRIADLLQDEGLIQPHGG
AWYLGRPLLVTRNDYGLGLMNGDIGITLALPREEGGERRWPLRVAFADGRGGIKWVLPSR
LQAVETVFAMTVHKSQGSEFTHAALVLPDALNPILTRELVYTGITRARSWFSLACAGRGQ
WVLEAAIERRVQRASGLLEA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgagcaactgctggaactgctcggccaatgggccggacgcggctggctgcgc
gagctggaccgagccttcgcggccttcctggtggaacaggcgcccgacgccgagccgctg
ctgatcctcgccgccgccctggccagccaccagctgggccgcggccacgtgtgcctggac
ctggccgcgaccctcgccgacagccgcttcgccctgtcgctgccgccggacggcgaactg
gaaggcacgccgctgacgctgcccggcgaactgctcgacggcctcgacctggccgcctgg
caagccgccctggccgacccgcgcctggtgggcgagggccccggcgccacgccgctggtg
ctggccggaccgcgcctgtacctgcgccgctactggcagtacgaacgcgaggtgcgcgcc
ggcatcgaccagcgcctggcccgtggcgaggccctgcgcgcggcgctgccggcggatgcc
ctgcgccaggccctggacgcgctcttcccgaaacaggcgaatgccccggcggactggcag
aaactggcctgcgccctggccgccggcaacgccttcggcatcgtcaccggcggccccggc
accggcaagaccaccaccgtggtgcgcctgctggcgttgctgcagagcctggccctgggc
ggcgagggcggacggccgctgcgtatccgcctggcggcgcccaccggcaaggcggcggcg
cggctcaacgaatccatcgccaacgccgtggaccgcctggacctcggcgccttcgccaac
ggcgagcagatacgccagcaggtgcccaaggaagtcaccaccctgcaccgcctgctcggc
agccgcccggacagccgccagttccgccaccaccccggcaacccgctggcgctggacctg
ctggtggtggacgaggcctccatggtcgacctggaaatgatggccgcgctgctcggcgcg
ctgccggacaaggcgcggctgatcctgctcggcgacaaggaccagctggcctcggtggag
gccggcgcggtgctcggcgaactgtgcagccgcgcccgcgagggccactaccgtgcggcg
acccgcgactggctggaggcggtcagcggcgagcaggtcgacgacgacctgctcgacgcc
cacggccagcccctcgaccaggccgtggccatgcttcgccacagccaccgcttcagttcc
gccagcggcatcggccagctcgccgaggcggtcaacgccggcgacgtggcggccatgcgc
gcggtctgggaacagggctacgccgacctggcgcgcctggccctggacgcccgcgacgac
cgcggcctgcgcgaactggtggtggaaggcggcggccgctacttcctcgacgccgccgcc
cgcccggatgtggccccgccccagggctaccgccactacctgcaggtgctgcgcgacacc
cgcccggcgccggacgccgcccaggccgagttcgacgcctgggccgggcgcgtgctcgcc
gctcacggccagttccaggtgctctgcgccctgcgccgcggcccctggggcgtggacggg
ctgaacctgcgcatcgccgacctgctgcaggacgaggggctgatccagccccacggcggc
gcctggtacctcggccgcccgctgctggtcacgcgcaacgactacggcctgggcctgatg
aacggcgacatcggcatcaccctggcgctgccgcgggaggagggcggcgagcgcaggtgg
ccgctgcgggtggccttcgccgacggccgcggcggcatcaagtgggtgctgcccagccgc
ctgcaggcggtggaaacggtgttcgccatgaccgtgcacaagtcccagggctcggagttc
acccacgccgccctggtgctgcccgacgcgctcaaccccatcctcacccgcgagctggtc
tacaccggcatcacccgcgcgcgcagctggttcagcctggcctgcgccggacgtggccag
tgggtgctggaggcggccatcgagcggcgggtgcagcgggccagcgggttgctggaagct
tga
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