Pseudomonas citronellolis: PcP3B5_24040
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Entry
PcP3B5_24040 CDS
T04637
Symbol
hupB_2
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcq03032
]
PcP3B5_24040 (hupB_2)
03036 Chromosome and associated proteins [BR:
pcq03036
]
PcP3B5_24040 (hupB_2)
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_24040 (hupB_2)
DNA replication proteins [BR:
pcq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PcP3B5_24040 (hupB_2)
Chromosome and associated proteins [BR:
pcq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PcP3B5_24040 (hupB_2)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PcP3B5_24040 (hupB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
Poly_export
Motif
Other DBs
NCBI-ProteinID:
AMO75843
UniProt:
A0A127MRB6
LinkDB
All DBs
Position
2610032..2610310
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AA seq
92 aa
AA seq
DB search
MAMTKEQLVRDIAESLDLTQASVRGVFEQLAQIVQDSLENDGELTLPGIGKLKVSERAAR
TGRNPQTGKSIEIAAKKVVRFVPAKALADSLN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaccaaggaacaactggtacgcgacatcgccgagtccctcgacctgacccag
gcctcggtgcgtggcgtgttcgagcaactggcgcagatcgtccaggacagcctggagaac
gacggcgagctgaccctgccgggcatcggcaagctcaaggtcagcgagcgcgccgcgcgc
accgggcgcaacccgcagaccggcaagagcatcgagatcgcggcgaagaaggtggtgcgc
ttcgtcccggccaaggccctggccgacagtctcaactga
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