Pseudomonas citronellolis: PcP3B5_32000
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Entry
PcP3B5_32000 CDS
T04637
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pcq03110
]
PcP3B5_32000 (clpC)
Chaperones and folding catalysts [BR:
pcq03110
]
Heat shock proteins
HSP100
PcP3B5_32000 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
Sigma54_activat
AAA_16
nSTAND3
AAA_7
AAA_14
TniB
IstB_IS21
AAA_18
AAA_28
RsgA_GTPase
RuvB_N
TsaE
DUF815
AAA_3
bpMoxR
NACHT
Zeta_toxin
NBD_SMAX1
AAA_25
DNA_pol3_delta2
AAA_19
Torsin
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
AMO76619
LinkDB
All DBs
Position
complement(3575163..3577904)
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AA seq
913 aa
AA seq
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MATLCEICNARPAVARVTVVQNGERKSMSICDHDYRQLMRHQSMLNPFDSLLGGGGLSRF
FDRFGGAGEEGDGFGMAAEVPRESVDATDAFSAQTLEILQRAAEKAHELRRNELDTEHLL
YVLADTDVVVALLKEMKLSPQDIKGYIDQHAQTGNASADAPVDRMTISPRLKKAFQLAFQ
ASRDLGHSYVGPEHLLIGLASVPESLAGTLLKKYGVPPETLRQKVVKIVGKGAEDGRVDT
PSGTPTLDKFGRDLTQLARQGKLDPVLGRAQEIENAIEVLARRKKNNPVLIGEPGVGKTA
IVEGLAQRIVNGDVPEVLRGKRLVEVNLNSMVAGAKYRGEFEERAKQLIDEVTAKHDELV
LFIDELHTIVGAGQGGEEGGLDIANVLKPALARGELSLIGATTLNEYQKYIEKDAALERR
FQPVFVPEPTVEQTIVILRGLRDKLEAHHQVTFADDAFVAAAELSDRYITNRFLPDKAID
LIDQAAARVRIGATSRPADIQELEAEIAQLKREQDYATSRKRFDEAKSFEELIGEKQTQL
EERSEAWERKTGSETLEVTTSSIAEVVSRLTGIPVAELTQEERQKLLKMEETLRERLIGQ
EHAVVAVSDAVRLSRAGLGQAHRPIATFLFLGPTGVGKTELAKALAESVFGDEQAIIRID
MSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYSVILLDEIEKAHPDVNNVLLQV
FDDGRLTDGKGRVVDFSNTIIIATSNLGASIIMDNLERPEAERMDDKALRDELMGVLKGH
FRPEFLNRVDDIIVFHALSRDDIRAIVRIQLQRVVRTAAAQDITLTVDESLVDHLVDVGY
QPEFGARELKRQIRQEVETRLAREILGDKVVSGDSIALGYDKEAGKVTLEKGGAQPPAAE
PPAPPADAEQTGT
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctctgtgaaatctgtaatgcgcgacccgccgttgcccgcgtgaccgtcgta
cagaatggcgagcgcaagtcgatgtcgatctgcgaccacgactaccgtcagttgatgcgg
caccagagcatgctcaatccgttcgactcgctgctggggggcggcgggctttcgcgcttc
ttcgacaggttcggcggcgcgggcgaggagggcgatggcttcggcatggccgccgaagtg
ccccgcgagtcggtcgatgccaccgacgccttcagcgcccagaccctggagattctccag
cgcgccgcggaaaaggcccacgagctcagacgcaacgagctggacaccgaacacctgctg
tacgtgctggccgacaccgacgtggtggtcgccctgctcaaggagatgaagctgtccccg
caggacatcaagggctacatcgaccagcacgcgcagaccggcaacgcctccgccgacgcg
ccggtggaccgcatgaccatctcgccgcgcctgaagaaggccttccagctggccttccag
gcctcgcgggacctggggcattcctacgtcggcccggagcacctgctgatcggcctggcc
tcggtgcccgagagcctggccggcacgctgctgaagaagtacggcgtgccccccgagacg
ctgcgccagaaggtggtcaagatcgtcggcaagggcgccgaagacggccgcgtggatacc
cccagcggcacgccgacgctggacaagttcggccgtgacctcacccagctggcgcgccag
ggcaagctcgacccggtgctggggcgggcccaggagatcgagaacgccatcgaggtgctg
gcccggcgcaagaagaacaacccggtgctgatcggcgagcccggcgtcggcaagacggcg
atcgtcgaagggctggcccagcgcatcgtcaacggcgacgtgccggaagtgctgcgcggc
aagcgcctggtggaggtgaacctgaactcgatggtcgccggcgccaagtaccgcggcgag
ttcgaggagcgggccaagcagctgatcgacgaagtcaccgccaagcacgacgagctggtg
ctgttcatcgacgagctgcacaccatcgtcggcgccgggcagggcggcgaggagggcggg
ctggacatcgccaacgtgctcaagccggccctggcccgcggcgagctgagcctgatcggc
gccaccacgctcaacgagtaccagaagtacatcgagaaggacgccgcgctggaacgccgc
ttccagccggtgttcgtccccgagccgacggtggagcagaccatcgtcatcctccggggc
ctgcgcgacaagctcgaggcccaccaccaggtgaccttcgccgacgacgccttcgtcgcc
gctgcggaactctccgaccgctacatcaccaaccgcttcctgccggacaaggccatcgac
ctgatcgaccaggccgccgcccgcgtgcgcatcggcgccacctcgcggccggcggacatc
caggaactggaggcggagatcgcccagctcaagcgcgagcaggactacgccacctcgcgc
aagcgcttcgacgaggcgaagagcttcgaggagctgatcggcgagaaacagacgcagctg
gaggaacgctccgaggcctgggaacgcaagaccggttccgagacactggaggtcaccacc
tcgtccatcgccgaggtggtctcgcggctgaccggcatcccggtggcggagctgacccag
gaagaacgccagaagctgctgaagatggaagagacgctgcgcgagcggctgatcggccag
gagcacgcggtggtggcggtcagcgatgcggtgcgcctgtcccgcgcgggcctcggccag
gcccaccggcccatcgccaccttcctgttcctcggcccgaccggggtgggcaagaccgag
ctggccaaggcgctggcggagagcgtgttcggcgacgagcaggcgatcatccgcatcgac
atgtccgagtacatggagcgccatgccgtggcccggctgatcggcgcgccgcccggctac
gtcggctacgacgagggcggccagctgaccgagcgcgtgcgccggcggccgtacagcgtg
atcctgctggacgagatcgagaaggcccaccccgacgtcaacaacgtgctgctgcaggtc
ttcgacgacggccggctcaccgacggcaagggccgggtggtggacttcagcaacaccatc
atcatcgccaccagcaacctcggcgcctcgatcatcatggacaacctcgaacgccccgag
gccgagcgcatggacgacaaggcgctgcgcgacgagctgatgggcgtactcaaggggcac
ttccgtccggagttcctcaaccgcgtcgacgacatcatcgtgttccatgcgctgtcccgc
gacgacatccgcgccatcgtccgcatccagctgcagcgggtggtgcgcacggccgccgcg
caggacatcaccctgacggtcgatgagtccctggtcgatcacctggtcgacgtgggctac
cagcccgagttcggcgcccgcgagctgaaacggcagatacgccaggaagtggagacgcgc
ctggcgcgggaaatcctcggggacaaggtggtttccggagacagcatcgccctgggctac
gacaaggaggccggcaaggtgaccctggagaagggcggcgcccagcccccggcggccgag
ccgcccgcgccgccggccgatgcggagcagaccggaacctga
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