Pseudomonas citronellolis: PcP3B5_38850
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Entry
PcP3B5_38850 CDS
T04637
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PcP3B5_38850 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_38850 (ung)
Enzymes [BR:
pcq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PcP3B5_38850 (ung)
DNA repair and recombination proteins [BR:
pcq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PcP3B5_38850 (ung)
Prokaryotic type
PcP3B5_38850 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMO77297
UniProt:
A0AAW6PBD4
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All DBs
Position
complement(4363938..4364633)
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AA seq
231 aa
AA seq
DB search
MTETDDRIKLEESWKSALREEFDKPYMRELGEFLRREKAAGKVIYPPGPLIFNALNSTPL
DKVKVVIIGQDPYHGPGQAHGLCFSVQPGVPAPPSLQNIYKELQRDLNVPIPSHGYLQHW
AEQGVLLLNTSLTVEQARAGSHAQAGWQQFTDRVIEVVNERCDGVVFLLWGSHAQSKQKL
IDPRKHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWALPEV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaccgacgatcgtatcaaactggaagagagctggaagagtgccctgcgcgag
gagttcgacaagccgtacatgcgcgagctgggcgaattcctgcgcagggagaaggccgcc
ggcaaggtgatctacccgccgggcccgctgatcttcaacgccctcaactccacgccgctg
gacaaggtgaaggtggtgatcatcggccaggacccctaccacggtcccggccaggcccac
ggcctgtgcttctcggtgcagccgggggtgccggcgccgccgtcgctgcagaacatctac
aaggagctgcagcgcgacctcaacgtccccattcccagccacggctacctgcagcactgg
gcggagcagggcgtgctgctgctcaacacctcgctgacggtggagcaggcccgcgccggc
tcccacgcccaggccggctggcagcagttcaccgaccgggtgatcgaggtggtcaacgag
cgctgcgacggcgtggtcttcctgctctggggctcccacgcgcagagcaagcagaagctg
atcgacccgcgcaagcacctgatcctcaagtccgcccatccgtcgccgttgtcggcttac
cgtggcttcctcggcaacgggcatttcagccggaccaacaagttcctcgagcagaatggc
aagacgccgatcgattgggcgttgccggaggtttga
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