Pseudomonas citronellolis: PcP3B5_38990
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Entry
PcP3B5_38990 CDS
T04637
Symbol
degA
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcq03000
]
PcP3B5_38990 (degA)
Transcription factors [BR:
pcq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PcP3B5_38990 (degA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
Sigma54_DBD
HTH_IclR
HTH_23
MarR_2
HTH_Crp_2
HTH_31
HTH_38
MarR
HTH_11
Fe_dep_repress
Sigma70_r4
HTH_20
HTH_Tnp_4
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AMO77311
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All DBs
Position
4380537..4381571
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AA seq
344 aa
AA seq
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MENRRNKPITLKELSARLGVHVSTVSRVLNGSQDSAALAASPETVQRIRQLAAELNYRPN
PHATSLKTQRSQVIGVLVPRLSDLVLATIYEGIDEAATNNRVFTFVFNTNDSLENQRERG
EMALARRVDGLIIGDAHMTSDNRFLQDIAKRGIPFVLVSRHAGDYCAVTCDDYQGGRLAA
QYFLEQGHTRLAVIAGETFASTGLDRTAGFVERCREAGIRIPPEWILNSHFDAPAGYESG
MKLLSESTPPTAIFAVNDFLAIGLMGAARAHGLTPGRDIAIIGFNDTPLASQLPIPLSSV
RSPMHEMGYRSVELLLKLMEGKTVESEKLAPSLIVRDSAQYHHP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccggagaaacaagcccatcacgctgaaggagctttctgcgcgcctgggggtc
catgtctccacggtatcccgcgtgttgaatggctcgcaggacagcgctgcactggcggcc
tcccccgaaacggtccagcgcatcaggcaactcgccgcggaattgaactatcgacccaac
ccacacgccaccagcctcaagacccagcgcagccaggtcataggggttctggtaccgcgc
ctgtcggacctggtgctggcgaccatctacgaaggcatcgacgaagcagcgacgaacaat
cgcgtcttcaccttcgtcttcaacaccaacgactcgctggagaaccaacgcgaaagagga
gaaatggccctggcccgacgggtcgacgggctgatcatcggcgatgcgcacatgacctcg
gacaatcggttcctgcaggacatcgccaagcgaggcattccgttcgtgctggtcagccgc
catgccggcgactactgtgcggttacttgcgacgactaccaaggtggccgcctggccgcg
cagtacttcctggaacaagggcatacccggctagcggtgattgctggggaaaccttcgcc
agcaccggtctggacagaaccgcgggcttcgtcgagcgctgccgggaagcaggtatccgg
attccacccgagtggatcctgaacagccatttcgatgcacctgccggctatgaatccggt
atgaagctgctttccgaatccaccccacccactgcaatattcgcggtcaacgacttcctc
gcaatcgggctcatgggtgcggccagggcccatggcctaacgccggggcgcgatatcgcc
atcattggattcaacgatacgcccctcgcctcccaactcccgataccactgagcagcgtg
cgctctcccatgcacgagatgggctatcgctccgtcgaactgctgctgaagctcatggaa
gggaaaacagtggaatccgaaaagctggcgccatcgctgatcgtccgggatagcgcccag
taccaccatccttga
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integrated database retrieval system
