Pseudomonas citronellolis: PcP3B5_39710
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Entry
PcP3B5_39710 CDS
T04637
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PcP3B5_39710 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_39710 (alkA)
Enzymes [BR:
pcq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PcP3B5_39710 (alkA)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PcP3B5_39710 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
RecR_HhH
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AMO77381
LinkDB
All DBs
Position
4463929..4464849
Genome browser
AA seq
306 aa
AA seq
DB search
MVSAMNAPITPLVLHLPYQPPWDWAQFHAHFALRRLAGVETLGEAHYRRSLRLEGVPGWM
DIRPLADEPALRLELHLDGAGADSAPLAARVRKMFDLDSDPRAVAAHLGADPLLRPLVEA
WPGLRLPCAFDPFEQAVRAIVGQQVTVKAAVTITGRLVQRLGQPLGNAVADGPQYLFPTP
RALAEADLDGIGMPGKRVASLQRFAAAVAEGALELHVEDGAQALVKRLCELPGIGPWTAE
YVALRAFGEADAFPTADLGLLKSPVWGEAGTSARDLQRRAEAWRPWRAYAAVYLWQAYSQ
GSRIGG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgccatgaacgcacccatcacgcccctcgtcctgcacctgccctaccagccg
ccctgggactgggcacagttccacgcccatttcgccctgcgccgcctggccggggtggaa
accctgggcgaggcgcactaccggcgcagcctgcgcctggaaggcgtgcccggctggatg
gacatccgcccgctggccgacgagccggcgctgcgcctggagctgcacctggacggcgcc
ggcgccgacagcgccccgctggccgcgcgggtgcgcaagatgttcgacctggacagcgac
ccgcgggcggtggccgcgcacctgggcgccgacccactactgcgcccgctcgtcgaagcc
tggccagggctgcgcctgccctgcgccttcgatccgttcgagcaggcggtgcgcgccatc
gtcggccagcaggtcacggtaaaggccgcggtgaccatcaccggccgcttggtgcagcgc
ctcggccagcccctgggcaacgccgtggccgacggcccgcagtacctcttccctaccccg
cgggccctggccgaggcggacctggacggcatcggcatgcccggcaagcgtgtggccagc
ctgcagcgcttcgccgccgcggtggccgaaggcgccctggaactgcatgtggaggatggc
gcgcaagcgctggtgaagcgcctctgcgaactgcccggcatcggcccctggaccgccgaa
tacgtggccctgcgcgccttcggcgaggccgacgccttccccaccgccgacctgggcctg
ctcaagtcgccggtctggggcgaggccggcaccagcgcccgcgacctgcaacgccgcgcc
gaggcctggcgcccctggcgcgcctacgccgccgtctatctctggcaagcctactcgcaa
ggcagccgcatcggaggatga
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