Pseudomonas citronellolis: PcP3B5_45170
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Entry
PcP3B5_45170 CDS
T04637
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PcP3B5_45170 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcq03019
]
PcP3B5_45170 (recQ_2)
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_45170 (recQ_2)
Enzymes [BR:
pcq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PcP3B5_45170 (recQ_2)
Messenger RNA biogenesis [BR:
pcq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PcP3B5_45170 (recQ_2)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PcP3B5_45170 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
ResIII
HTH_20
HTH_29
HTH_23
HTH_7
DUF433
GerE
Motif
Other DBs
NCBI-ProteinID:
AMO77913
LinkDB
All DBs
Position
complement(5049389..5051533)
Genome browser
AA seq
714 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQARIIERVASGGDALVLMPTGGGKSLCFQVPALLREGLT
VVVSPLIALMEDQVATLDELGVPVAALNSSLSPEAQRDIAARLQRGEIKLLYLAPERLVQ
PRMLDFLQRLNVGLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEMIQRLHLQNAEQFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCLSRKK
VEEVAEFLSNQGFPALPYHAGLSNELRAFHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLLLRQMMQNSEGDERHKRVERHK
LEAMLALCEEPRCRRQALLAYFDEVMPNPCGHCDNCVDGVETWDATEPARQALSAIYRSG
QRYGVGHLVDILMGKETEKVRSLGHQHLAVFGIGKGRPEDEWRTLFRQLVARGLADVDLD
GYGSLRLTEACRPLLRGEETLALRRDPKPQRSKSPSSGGASPASQLVRQEEREMWEALRT
LRRKLAQEHSVPPYVIFPDATLLEMLRSQPTTLTAMAQVSGVGARKLERYGQAFLDVLTE
SEAAPATPAPVVDLSHELVSLARAGMTPAQIARQLDCTEKNVYNLLAEAIAAQQLSLEQA
LDLPEELLAEVQDAFLEEDGELPPVAALAERFEGRVPQGVLHCVRAALQAELEV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcccagcgcatcctcaaagacgtattcggctacgacgccttccgcggc
aaccaggctcgcatcatcgaacgcgtggccagcggcggcgacgccctggtgctgatgccc
accggcggcggcaagtcgctgtgcttccaggtcccggcgctgctgcgcgagggcctgacc
gtggtggtttcgccgctgatcgcgctgatggaagaccaggtcgccaccctcgacgagctg
ggcgtgccggtcgccgcgctgaactcctcgctcagccccgaggcgcagcgagacatcgcc
gcgcgcctgcagcgcggcgagatcaagctgctctacctcgcccccgagcgcctggtgcag
ccgcgcatgctggacttcctgcagcgcctgaacgtcggtctgttcgccatcgacgaggca
cactgcgtgtcgcaatggggccacgacttccgcccggaatacctgcaactgggccagctc
gccgaactgttcccccacgtgccgcgcatcgccctgaccgccacggcggacatgcgcacc
cgcgaggagatgatccagcgcctgcacctgcagaacgccgagcagttcctctccagcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggagcagccgcgcaagcagctgctg
ggcttcctcgccgagcgccgcggcgacgccggcatcgtctactgcctgtcgcgcaagaag
gtcgaggaggtcgccgagttcctctccaaccagggcttcccggcgctgccgtaccacgcc
gggctgtccaacgagctgcgcgccttccaccagaagcgcttcctcaacgaggaagggctg
atcatggtggcgaccatcgccttcggcatgggcatcgacaagcccaacgtgcgcttcgtc
gcccacctcgacctgcccaagagcctggaggcctactaccaggaaactggccgcgccggc
cgcgacggcctgccggcggacgcctggatggcctacggcctgcaggacgtgctgctgctg
cggcagatgatgcagaactccgagggcgacgagcgccacaagcgcgtcgaacggcacaag
ctcgaagccatgctggccctgtgcgaggagccgcgctgccggcgccaggcgctgctggcc
tacttcgacgaggtcatgcccaacccctgcgggcattgcgacaactgcgtcgacggcgtc
gagacctgggacgccaccgagcccgcgcgccaggcgctgtcggccatctaccgcagcggc
cagcgctacggcgtcggccacctggtggacatcctgatgggcaaggaaaccgagaaggtg
cgcagcctcggccaccagcacctggcggtgttcggcatcggcaagggccgccccgaggac
gagtggcgcaccctgttccgccagttggtggcgcgcggcctggccgacgtcgacctcgac
ggctacggcagcctgcgcctgaccgaggcctgccggccgctgctgcgtggcgaggagacg
ctggccctgcgccgcgatcccaagccgcagcgcagcaagtccccgtcatccggcggcgcc
agcccggccagccagctggtgcgccaggaagagcgcgaaatgtgggaagccctgcgcacc
ctgcggcgcaagctggcgcaggaacattcggtgccgccctacgtcatcttccccgatgcc
accctgctggaaatgctgcgcagccagccgaccacgctcaccgccatggcccaggtcagc
ggcgtcggcgcgcgcaagctggagcgctacggccaggccttcctcgacgtgctcaccgag
tccgaggcggcgcccgccacgccggcgccggtggtcgacctcagccacgaactggtcagc
ctggcccgcgccggcatgaccccggcgcagatcgcccgccagctcgattgcaccgagaag
aacgtctacaacctgttggccgaggccattgccgcgcagcagctgagcctggaacaggcc
ctggacctgcccgaggagctgctggccgaagtgcaggatgccttcctcgaagaggacggc
gagctgccgccggtagcggccctggccgagcgcttcgagggccgcgtgccgcagggcgtg
ctgcattgcgtgcgcgccgcgctgcaggccgagctggaagtctga
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