Pseudomonas citronellolis: PcP3B5_50170
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Entry
PcP3B5_50170 CDS
T04637
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03030
DNA replication
pcq03430
Mismatch repair
pcq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PcP3B5_50170 (holC)
03430 Mismatch repair
PcP3B5_50170 (holC)
03440 Homologous recombination
PcP3B5_50170 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcq03032
]
PcP3B5_50170 (holC)
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_50170 (holC)
Enzymes [BR:
pcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PcP3B5_50170 (holC)
DNA replication proteins [BR:
pcq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PcP3B5_50170 (holC)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PcP3B5_50170 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AMO78403
LinkDB
All DBs
Position
5550314..5550742
Genome browser
AA seq
142 aa
AA seq
DB search
MTRVDFYVIPSADPDARLTIACRLADKAWRQGMRVYLLCADEAQREALDARLWSFRKEAF
VPHNAAEEDAQAPVTLGLGGPPAGRRDLLINLTLAVPAFAGEFSRIAELVVEEPAIRQAA
RENFRFYREQGYPLQDHRLPRL
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggtcgacttctacgtcatccccagcgccgatcccgacgcgcgcctgaccatc
gcctgccgcctggccgacaaggcctggcggcagggcatgcgggtgtacctgctgtgcgcc
gacgaagcccagcgcgaggccctggacgcgcgcctgtggagcttccgcaaggaagccttc
gtgccgcacaacgccgccgaggaagacgcccaggccccggtcaccctgggcctgggcggg
ccgccggcgggccgccgcgacctgctgatcaacctgacgctggcggtgccggccttcgcc
ggcgagttctcgcgcatcgccgaactggtggtggaggagccggccatccgccaagcggcg
cgggagaatttccgcttctaccgcgagcagggctatcctttgcaggaccatcgcctgccg
cgcctctga
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