Pseudomonas citronellolis: PcP3B5_50280
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Entry
PcP3B5_50280 CDS
T04637
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_50280 (sbcC)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PcP3B5_50280 (sbcC)
Archaeal homologous recombinant proteins
PcP3B5_50280 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
T2SSE
AAA_21
ABC_tran
cobW
nSTAND3
AAA_22
ABC_ATPase
AAA_15
NTPase_1
RsgA_GTPase
AAA
Motif
Other DBs
NCBI-ProteinID:
AMO78414
LinkDB
All DBs
Position
complement(5564990..5568430)
Genome browser
AA seq
1146 aa
AA seq
DB search
MRILSLRLKNLNSLKGEWKIDFAAEPFAGNGLFAITGPTGAGKTTLLDAICLALYHRTPR
MNTLSQSGNELMTRHTADCLAEVEFEVRGRRYRAFWSQRRARDKVDGALQAPKVELARIE
AAGGEGEILTDKINDKLRQTEQLTGLDFGRFTKSMLLAQGGFAAFLEASANDRAALLEEL
TGTEIYGLISQRVYERSKAAQNDLELLKSRAEGMELLSEEQRGELQAEAARLLAEEAPLL
QRQAELQAQRRWREDLSRAEQQHQQAAAREQQARDALLQATPDLQRLAASEPAARLQPLH
GAWQQARQALERDETGLADLRRQQRDCAEQAVRSLWQASQYSEQWAGQRQRAIDELATQR
HEVQAQLAAHPQRARLGELLGGWRAQFVQREQLGGELQGARARLEQEASAIQSLHGQLTA
QGQALAGAGQALDAARQAEAQQQARLQSLLQGAGESALRERWQQLQQQGRALDRLQQLAQ
SREQANAQAARLQPQLDSLQQRQAQKEAAIAELRERYKTLKQQVADKEKLLEQEQRIQAL
EAYRAQLQPGEACPLCGSHEHPAIASYQALDVSQTRRALDECRAALAALESDGVALRDEL
SDVTAQAAQARQQLEQLREQLHQLDAQWQSQSAEQNLAIEDAAGLAAIRQAQEQALADLQ
ECLAALDALKGELQQAASARESAERSHAAALQQEALLRRDLDNAQQRQAEQQQRLEQLQT
QAERQAAELLASLDGFAAALPEQGAAWLAEREGEWRAWQQAQQRDQQLQEAEREARRLLQ
EAEAQAGQWRERWSASGEPALPELEPEAQPQQALQAAEAALQAAQRQADALLGREQSLAA
HLEQARTTLAECERAWQQGLAESPFADLAAFLAALLEDGERQRLGELKTRLDTALTEAVA
LRVAAEEAERQLRAQPLGELELAALDEQLQALATQLRELGQRQGEVRAQLQGDDARRASQ
QALFAEIAAQEAHHDLWQRLNGLIGSSDGAKYRRFAQGLTLDHLVHLANRQLQRLHGRYQ
LARRSDGELELEVVDTWQGDVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLD
EGFGTLDGETLEVALDALDSLNASGKSIGVISHVEALKERIPVQLKVHKGVGMGYSRLDA
CFAVQS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctcagcctgcgcctgaagaacctcaactcgctcaagggcgagtggaagatc
gacttcgccgccgagcccttcgccggcaacggcctgttcgccatcaccgggcctaccggc
gccggcaagaccaccctgctggacgccatctgcctggccctgtaccaccgcacgccgcgc
atgaacacgctgtcgcagagcggcaacgagctgatgacgcggcacaccgccgactgcctc
gccgaggtcgagttcgaggtcaggggccgccgctaccgcgccttctggagccagcgccgg
gcccgcgacaaggtcgacggcgcgctgcaggcgcccaaggtggaactggcgcgcatcgag
gcggccggcggcgagggggaaatcctcaccgacaagatcaacgacaagctgcgccagacc
gagcagctcaccggcctcgacttcggccgcttcaccaagtccatgctgctggcccagggc
ggtttcgccgccttcctcgaagccagcgccaacgaccgcgcggcactattggaagaactc
accggcaccgagatctacgggctgatttcccagcgcgtgtacgagcgcagcaaggcggcg
cagaacgatctggagctgctgaagagccgtgccgaaggcatggagctgctcagcgaggaa
cagcgcggcgagttgcaggccgaggctgcacgcctgctggccgaggaagccccgctgctc
cagcgccaggccgaactgcaggcccagcgccgctggcgcgaggacctttcccgtgccgaa
cagcagcaccagcaggccgccgcgcgggagcagcaggcccgcgatgccctgctccaggca
actcccgacctgcagcgcctggctgccagcgagccggcggcgcgcctgcagcccctgcat
ggggcctggcaacaggcgcgccaggcgctggagcgggacgaaaccggcctggcggacctg
cgacgccagcagcgggactgcgccgagcaggccgtgcgcagcctgtggcaggccagccag
tacagcgagcagtgggcggggcagcgccagcgcgccatcgatgaactcgcaacgcagcgc
cacgaggtgcaggcgcagctcgccgcgcacccgcaacgcgcccgcctgggcgaactgctg
gggggctggcgcgcgcaattcgtccagcgcgaacagctcggcggcgaactgcagggcgcc
cgcgcacgcctggagcaggaagcctccgccatccaatcgttgcacggccagctcaccgcc
cagggccaggccctggccggcgccgggcaggcgctggacgcggcgcgccaggccgaggcg
cagcagcaggcgcgcttgcagtccctgctgcaaggcgccggcgaaagcgccctgcgcgag
cgctggcagcagttgcagcaacagggcagggcgctggaccgcctgcaacagctggcgcag
agccgcgaacaggccaacgcgcaggctgcccgcctgcaaccccagctcgactcgctgcag
caacgccaggcgcagaaggaagccgcaatcgccgaactgcgcgagcgctacaagacgctg
aagcagcaggtcgccgacaaggagaagctgctggagcaggagcagcgcatccaggccctg
gaggcctaccgcgcacagttgcagcccggcgaggcctgcccgctgtgcggctcccacgaa
cacccggccatcgccagctaccaggcgctggacgtgtcgcagacgcgccgcgccctcgat
gaatgccgcgcggccctggccgctctggaaagcgacggcgtggcgctgcgcgacgaactc
tccgacgtgacggcccaggcagcacaggcccggcaacagctggagcaactgcgcgaacaa
ctgcaccagctcgatgcccaatggcagagccagtcggccgaacagaacctcgccatcgag
gatgccgccggcctggccgcgatccgccaggcccaggaacaggccctggccgacctgcag
gaatgcctggcggcgctcgatgcgctcaagggcgagttgcagcaggccgcgagtgcccgc
gagagcgccgagcgcagccatgcggccgcgctgcagcaggaggccctgctgcgtcgtgac
ctggacaacgcacagcagcgccaggcggaacagcagcaacgcctggagcaactgcaaacc
caggccgaacgccaggccgccgaactgctggccagcctcgacggtttcgccgccgccttg
cccgagcaaggcgcagcctggctggccgagcgcgaaggcgaatggcgcgcctggcagcag
gcccagcaacgggaccagcaactgcaggaggccgagcgcgaagcccggcgcctgttgcag
gaagccgaagcgcaggccgggcaatggcgcgaacgctggagcgccagtggcgagccggca
ttgccggagctggagcccgaggcgcagccacaacaggccctgcaagcggcggaggcggcc
ctacaggcggcgcagcgccaggccgatgcgctgctcggccgcgagcagagccttgccgcg
cacctggagcaggcgcgcacgactctggccgaatgcgagcgagcctggcagcaggggtta
gctgaaagcccgttcgccgacctggcggccttcctcgccgcgttgctggaagatggcgag
cgccagcgcctgggcgaactcaagacgcgcctggacaccgcgttgaccgaagccgtggcg
ttgcgcgtcgccgccgaggaagccgagcgccaactgcgcgcgcaaccgctgggcgaactg
gagctggcggccctcgacgagcagttgcaggccctcgccacccagctgcgcgaactgggc
cagcgccagggcgaagtgcgcgcgcaactgcaaggcgacgacgcccgccgcgccagccag
caggcgctgttcgccgagattgccgcgcaagaggcgcaccacgatctctggcagcgcctg
aacggcctgatcggttcctccgatggcgccaagtaccggcgctttgcccagggcctgacc
ctcgaccacctggtgcacctggccaaccggcaactgcagcgcctgcacggccgctaccaa
ctggcgcggcgcagcgacggcgagctggaactggaggtagtggacacctggcagggcgat
gtcgcccgcgactgccgcaccctctccggcggcgagagcttcctggtcagcctggcgctg
gccctggcgctgtccgacctggtcagccacaaaaccagcatcgactcgctgttcctcgac
gaaggcttcggcaccctcgacggcgagaccctggaagtggcgctggacgccctcgacagc
ctcaacgccagcggcaagagcatcggcgtgatcagccacgtcgaggcgctcaaggaacgc
atccccgtgcaactcaaggtgcacaaaggtgtcggtatggggtacagccgcctcgacgcg
tgcttcgccgtgcaatcctga
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integrated database retrieval system
