Pseudomonas citronellolis: PcP3B5_52120
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Entry
PcP3B5_52120 CDS
T04637
Symbol
clpB_2
Name
(GenBank) Chaperone protein ClpB
KO
K11907
type VI secretion system protein VasG
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq02025
Biofilm formation - Pseudomonas aeruginosa
pcq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PcP3B5_52120 (clpB_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PcP3B5_52120 (clpB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcq02044
]
PcP3B5_52120 (clpB_2)
Secretion system [BR:
pcq02044
]
Type VI secretion system
Imp/Vas secretion system core components
PcP3B5_52120 (clpB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_16
AAA_22
TniB
nSTAND3
Clp_N
Sigma54_activat
AAA_7
NACHT
NBD_SMAX1
AAA_24
Hpr_kinase_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMO78595
LinkDB
All DBs
Position
5790426..5793002
Genome browser
AA seq
858 aa
AA seq
DB search
MINLDLQQLVQALDTETRRDLEGAAERCVARNGSKILVEDLLLALLERPQGLLQRALQDA
GVDAGELAAALQPRAENSASRNPVFAVELMQWLQDALLVANLELRQSLIDQAALILALLR
NPLRYAGSHYQELLARLNAERLREYALAQQERQPATGGANSGESMLERFTHNLTRQAREG
RLDPVLCRDDAIRQMIDILARRRKNNPIVVGEAGVGKTAVVEGLAARIVAGEVPEALQGV
ELLSLDMGLLQAGASVKGEFERRLKGVIEEVKGAAQPTILFIDEAHTLIGAGGQAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGLAK
VYEASHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLERL
RGELAEGERQRQALRRDREAGLAVDEQALEALQQRLEQAAVEQTELEQRWQRQRELANEL
LDLRQRLAKAREDAEEDSEGLEERLHQTHAALRDAQQDERLVSFEVCPRLVAEVISHWTG
VPLSQLAREHNAKVASFAADLRQRVRGQEQAVQALDRAMRATAAGLNKPDAPVGVFLLVG
PSGVGKTETALALADLLYGGERFLTTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEA
VRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGIANDGEGREIDFRNTLILMTSNLASERI
AALCADGQRPTAQALEEAIRPALSRHFKPALLARMRVVPYYPVEGEVLHELVRLKLARLG
DRLQRRQLQFSHCDALVEHLAARCTQGDSGARLIDQLLDQHLLPQIADRLLQAMAMGETL
NRVHATLEGGVAVTCEFA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacctcgacctgcaacaactcgtccaggccctggacaccgagactcgccgcgac
ctggaaggcgccgccgagcgctgcgtggcccgcaacggcagcaagatcctcgtcgaggat
ctgctgctggcgctgctggaacgcccccagggcctgttgcaacgcgccctgcaggatgcc
ggggtggacgccggcgagctggcggcggcgctgcagccgcgcgccgagaacagcgcctcg
cgcaacccggtgttcgccgtggagctgatgcagtggctgcaggacgccctgctggtggcc
aacctggaactgcgccagagcctgatcgaccaggccgcgctgatcctcgccctgctgcgc
aatcccctgcgctatgccggcagccactaccaggagctgctggccagactgaacgcggag
cgcctgcgcgaatacgccctggcccagcaggagcggcagcccgccactggcggcgccaat
tccggcgagtcgatgctcgagcgcttcacccacaacctcacccgccaggcccgcgaaggc
cggctggacccggtgctgtgccgcgacgacgcgatccgccagatgatcgacatcctcgcg
cggcggcggaagaacaaccccatcgtggtcggcgaggccggggtgggcaagaccgccgtg
gtcgaggggctggccgcgcgcatcgtcgccggcgaggtgcccgaggcgttgcagggcgtc
gaactgctgtccctggacatgggcctgctgcaggccggcgccagcgtcaagggcgagttc
gagcgccgcctgaagggtgtcatcgaagaagtgaagggcgcggcccagccgaccatcctg
ttcatcgacgaagcccataccctgatcggcgccggcggccaggcgggcggctcggacgcg
gccaacctgctcaagccggccctggcgcgcggcgagctgcgcaccatagccgcgaccacc
tgggccgaatacaagaagtacttcgagaaggacccggcgctggcgcggcgcttccaaccg
gtgcaactgcacgaacccagcgtggccgaggcggtgaccatcctgcgtggcctggccaag
gtctacgaggccagccacggcatctacctgcgcgacgacgccgtggtcgccgcggccgag
ctctcggcgcgctacctggccggccgccagttgccggacaaggccgtggacgtgctcgac
accgcctgcgcccgtgtgcgcatcagcctggccgccgctccggaaagcctggagcggctg
cgcggcgaactggccgaaggcgagcgccagcgccaggccctgcgccgcgaccgcgaggcc
ggcctggcggtcgacgagcaggccctggaggcattgcagcaacgcctggaacaggccgct
gtggaacaaaccgagctggaacagcgctggcaacgtcagcgtgagctggccaacgaactg
ctcgacctgcgccagcgcctggccaaggcccgcgaggacgcggaagaagattcggaaggc
ctggaagaacgcctgcaccagacccacgctgccctgcgcgacgcccagcaggacgagcgc
ctggtcagcttcgaggtctgcccgcggctggtcgccgaggtcatcagccactggaccggc
gtgcccctgtcgcaactggcccgcgagcacaacgccaaggtcgccagcttcgccgccgac
ctgcgccagcgcgtgcgcggccaggaacaggcggtgcaggcgctggaccgggccatgcgc
gccaccgccgccggcctgaacaaacccgatgcgccggtaggtgtgttcctgctggtcggc
cccagcggcgtcggcaagaccgagaccgccctggccctggccgacctgctgtatggcggc
gagcgcttcctcaccaccatcaacatgtccgagttccaggagaagcacaccgtgtcccgg
ctgatcggcgcgccccccggctacgtcggctacggcgaaggcggcatgctcaccgaggcc
gtgcgccagaagccctactcggtggtgctgctggacgaggtggagaaggccgacccggac
gtgctcaacctgttctaccagatcttcgacaaaggcatcgccaacgacggcgaaggccgc
gagatcgatttccgcaacacgctgatcctgatgacctcgaacctcgccagcgagcgcatc
gccgcactctgcgccgatggccagcggcccaccgcccaggcgctcgaggaagccatccgc
ccggcgctcagccgtcacttcaagccagccctgctggcccgcatgcgcgtggtgccctac
tacccggtggagggtgaagtgctgcatgagctggtgcgcctcaagctggcccgcctgggc
gatcgcctgcagcgccgccagctgcagttcagccattgcgatgccctggtcgaacatctc
gccgctcgctgcacccagggcgacagcggcgcccgcctgatcgaccagttgctcgaccag
cacctgctaccacagatcgccgaccgcctgctgcaggctatggccatgggcgaaacgctg
aaccgcgtgcacgccaccctcgagggtggcgtggccgttacctgcgagttcgcctga
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