Pseudomonas citronellolis: PcP3B5_54140
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Entry
PcP3B5_54140 CDS
T04637
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PcP3B5_54140 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcq03019
]
PcP3B5_54140 (pnp)
03016 Transfer RNA biogenesis [BR:
pcq03016
]
PcP3B5_54140 (pnp)
Enzymes [BR:
pcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PcP3B5_54140 (pnp)
Messenger RNA biogenesis [BR:
pcq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PcP3B5_54140 (pnp)
Transfer RNA biogenesis [BR:
pcq03016
]
Prokaryotic type
tRNA degradation factors
PcP3B5_54140 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
S1_2
KH_2
DUF7275
Motif
Other DBs
NCBI-ProteinID:
AMO78787
UniProt:
A0A127MZW4
LinkDB
All DBs
Position
complement(6006155..6008260)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVTKKFQFGQSTVTLETGRIARQATGAVLVTMDDVTVLVTVVGAKQADPNKGFFPLSV
HYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVSTG
KKTDPDIAAMIGTSAALAISGIPFAGPIGAARVGFHPEVGYILNPTYEQLQSSSLDMVVA
GTSDAVLMVESEADELTEDQMLGAVLYAHEEFQAVIRAVAELATEAGKPSWNWSAPAENT
ALIEAIKAEFGAAISDAYTITIKQERYAALDALREEIVARFAGEGEGQYSASEVKDVFGL
LEYRTVRENIVNGKPRIDGRDTRTVRPLKIEVGVLGKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGERKDPFMLHYNFPPFSVGECGRMGSPGRREIGHGRLARRGVAAMLPSQD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPVRAPVAGIAMGLVKEGDKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALEQALEARLNILGQMNQ
VIAQPRAELSENAPTMLSMKIDPDKIRDVIGKGGATIRGICEETKASIDIEDDGSVKIYG
ETKEAAEAAKQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDKRI
DKVTDVLKEGEEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaaccaagaaattccagttcggtcaatcgaccgtaaccctcgagactggc
cgcattgcccgccaggccaccggcgccgtgctggtcaccatggacgacgtcaccgtgctg
gtcaccgtcgtgggcgccaagcaggccgacccgaacaagggcttcttcccgctgtccgtc
cactaccaggaaaagacctacgcagccggccgcatccccggtggtttcttcaagcgtgaa
ggccgtccttccgagaaggaaaccctgacctcgcgcctgatcgaccgtccgatccgcccg
ctgttccccgaaggcttcatgaacgaagtgcaggtcgtctgcaccgtcgtttccaccggc
aagaagaccgatccggacatcgccgccatgatcggcacctccgccgccctggcgatctcc
ggcattcccttcgccggcccgatcggcgccgcccgcgtgggcttccacccggaagtcggc
tacatcctcaacccgacctacgagcaactgcagagctccagcctcgacatggtcgtggcc
ggtacctccgacgccgtgctgatggtcgagtccgaagccgacgagctgaccgaagaccag
atgctgggcgccgtgctgtacgcccatgaagaattccaggcggtcatccgcgccgtcgcc
gaactggccaccgaagccggcaagccgagctggaactggagcgccccggccgagaacacc
gccctgatcgaggccatcaaggccgagttcggcgccgccatttccgacgcctacaccatc
accatcaagcaggagcgctacgccgccctggacgccctgcgtgaagagatcgtcgccagg
ttcgccggcgaaggcgaaggccagtactcggccagcgaggtcaaggacgtcttcggcctg
ctggaataccgcaccgttcgcgagaacatcgtcaacggcaagccgcgtatcgacggtcgc
gacacccgcaccgtgcgtccgctgaagatcgaagtcggcgtgctcggcaagacccacggc
tcggccctgttcacccgtggcgaaacccaggccctggtcgtcgccaccctcggcaccgcc
cgtgacgcccaactgctcgacaccctcgaaggcgagcgcaaggacccgttcatgctgcac
tacaacttcccgccgttctcggtgggcgagtgcggccgcatgggcagcccgggccgtcgc
gaaatcggccacggccgtctggcccgtcgtggcgtcgccgccatgctgccgtcgcaggac
gagttcccctacaccatccgcgtggtttccgagatcaccgaatccaacggttccagctcc
atggcttccgtgtgcggcgcctccctggcgctgatggacgccggcgtgccggttcgcgct
ccggttgccggcatcgccatgggcctggtcaaggaaggcgacaagttcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgccggtaccgcc
aagggcgtcactgccctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gagatcgccctggagcaggcgctggaagcgcgcctgaacatcctcggccagatgaaccag
gtcatcgcccagccgcgcgccgagctgtcggaaaacgccccgaccatgctgtcgatgaag
atcgatccggacaagatccgcgacgtcatcggcaagggcggcgccaccatccgcggcatc
tgcgaagagaccaaggcctcgatcgacatcgaggacgacggcagcgtgaagatctacggc
gaaaccaaggaagccgccgaggccgccaagcagcgcgtcctgggcatcaccgcggaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggcgccttcgtc
aacatcctgccgggcaaggacggtctggtgcacatctcgcagatcagcgacaagcgcatc
gacaaggtcaccgacgtgctcaaggaaggcgaggaagtcaaggtcctggttctggacgtc
gacaaccgcggccgcatcaagctgtccatcaaggacgtggccgctgccgaagcctctggc
gtctaa
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