Pseudomonas citronellolis: PcP3B5_54160
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Entry
PcP3B5_54160 CDS
T04637
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcq03016
]
PcP3B5_54160 (truB)
Enzymes [BR:
pcq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PcP3B5_54160 (truB)
Transfer RNA biogenesis [BR:
pcq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PcP3B5_54160 (truB)
Prokaryotic type
PcP3B5_54160 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AMO78789
UniProt:
A0A127MZU4
LinkDB
All DBs
Position
complement(6008796..6009710)
Genome browser
AA seq
304 aa
AA seq
DB search
MAQVKRIRRAVNGVLVLDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLAQLGVTTTTGDAEGEVLEERQVTVGREALEALLPRFRGEIE
QVPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLAFEAPCATLAVSCSKGTYI
RTLVEDIGRELGCGAHVAALRRTQAGPFGLAQAVTLEELVQVHAEGGNEALDRFLLPVDA
GLEHWPLLQLSEHSAYYWLHGQPVRAPEAPKFGMLRVQDHEGRFIGIGEVTDDGRIAPRR
LIRS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaaacgtatccgccgtgcggtcaacggcgtgctggtgctcgacaagccg
cgcggcatgagctccaaccaggccctgcagaaggtgcgctggctgctcaatgcggaaaag
gccgggcacaccggcagcctcgaccccctggccaccggcgtactgccgctgtgcttcggc
gaggccaccaagttctcccagtacctgctggatgccgacaagggctacgagaccctggcc
cagctgggcgtcaccaccaccaccggcgacgccgagggcgaagtgctcgaggaacgccag
gtgaccgtcggtcgggaggccctagaggccctgctgccgcgcttccgcggcgaaatagag
caggtgccgccgatgtattcggcactgaagaaggacggccagccgctgtacaagttggcc
cgcgcaggagaggtagtggagcgcgaggcgcgttctgttactattgcgcgcttggaactg
ctggccttcgaggcgccttgcgccaccctggccgtttcctgcagcaagggcacctacatc
cgcaccctggtcgaggacatcggccgcgagctgggctgcggcgcccacgtggctgcgctg
cggcgcacccaggcgggccccttcggcctggcccaggcggtgacgctggaggaactggtg
caggtccatgccgagggcggcaacgaggccctcgaccgcttcctgctgccggtggacgcc
ggcctggaacactggccgctgctgcagctgtccgagcacagcgcctactattggctgcat
gggcagccggtacgcgcacccgaggcgccgaagttcggcatgctacgggtacaggatcac
gaaggtcgcttcatcggtatcggtgaggtgaccgacgacgggcgcatcgcgccgcgtcga
ctgattcggtcgtaa
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