Pseudomonas citronellolis: PcP3B5_54640
Help
Entry
PcP3B5_54640 CDS
T04637
Symbol
fadD_6
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq00061
Fatty acid biosynthesis
pcq00071
Fatty acid degradation
pcq01100
Metabolic pathways
pcq01212
Fatty acid metabolism
pcq02024
Quorum sensing
pcq04146
Peroxisome
Module
pcq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PcP3B5_54640 (fadD_6)
00071 Fatty acid degradation
PcP3B5_54640 (fadD_6)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PcP3B5_54640 (fadD_6)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PcP3B5_54640 (fadD_6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcq01004
]
PcP3B5_54640 (fadD_6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcq04147
]
PcP3B5_54640 (fadD_6)
Enzymes [BR:
pcq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PcP3B5_54640 (fadD_6)
Lipid biosynthesis proteins [BR:
pcq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PcP3B5_54640 (fadD_6)
Exosome [BR:
pcq04147
]
Exosomal proteins
Exosomal proteins of breast milk
PcP3B5_54640 (fadD_6)
Exosomal proteins of breast cancer cells
PcP3B5_54640 (fadD_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3479
Motif
Other DBs
NCBI-ProteinID:
AMO78833
LinkDB
All DBs
Position
6058587..6060278
Genome browser
AA seq
563 aa
AA seq
DB search
MNEARYLQALHRLQAAAWPAGTPREPHYPHGQQPLGDYLRTWARLKPEAPALDFYGHSLA
WAELDRLADRCAALLAELGVRPGERVSVFLPNCPQLHIAFYGILRAGAVYVPVSPLSKAL
ELGYQLNDSGAETLLCFDQLLPIVRQVRGETPLRRLLATSLSELCPATPSLPPPDMLLAP
KLAGDDFIDFLPALEACRGPVPQHQARLDEVAALNYTGGTTGLPKGCVHTHGDMLYTCAS
YLSVANRLEQDSVLLNFLPEFWIAGENGGLLFPVFAGCRLVLLARWDAEAFMAAVQRYRV
SHCTLLVDSAAEVLEHPRVGEFDFSSLRMSGAISFIKKLTPSYRRRWRELTGTTLVETSF
GMTETHTCDTFIVGFQQDDFDLNSAPTFVGLPVPGTDFKVCDFETGELLPLGAEGELCIR
SPSLLKGYWNRPEASAEALRDGWLHTGDLGQITELGFIRYLGRRKEMIKVNGMSVFPSEL
EALLGQHPAVLASAVLARPDARRGQQPVAFVVLKPGAGESAESLLAWCREAMAVYKVPEV
RMVASLPMTATGKIKKNELEPLL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcccgttacctccaggcgctgcatcgcctccaggccgccgcctggccagcc
ggcacgccgcgtgagccacactacccgcatgggcagcagccgcttggcgactacctgcgc
acctgggcacgcctgaagccggaagcgcccgcgctggacttctatggccacagcctggcc
tgggccgagctggaccgcctggccgaccgctgcgccgcgttgctggccgagctgggcgtg
cgccccggcgagcgcgtctccgtgttcctgcccaactgtccgcagttgcacatcgccttc
tacggcatcctgcgcgcgggggcggtgtacgtgccggtcagcccgttgtcgaaggcgctg
gagctgggctaccagctcaacgacagcggcgccgaaaccctgctgtgcttcgaccagttg
ctgccgatcgtgcgccaggtgcgcggtgaaacgccgttgcgccggctgctggccaccagc
ctcagcgagctgtgcccggccacacccagcctgccaccgcccgacatgctgctggcgccg
aaactggccggggacgacttcatcgacttcctcccggccctggaggcttgccggggaccg
gtgccgcagcaccaggcgcggctcgacgaggtggcggcgctcaactacaccggcggcacc
accggcctgcccaagggctgcgtgcatacccacggcgacatgctctacacctgcgccagc
tacctgtcggtggcgaaccggctggagcaggacagcgtactgctgaacttcctgccggaa
ttctggatcgccggggagaacggcggtctgctgttcccggtgttcgccggctgccgcctg
gtgctgctggcgcgctgggacgccgaggccttcatggccgccgtgcagcgctaccgcgtc
agccactgcaccctgctggtcgacagcgcggccgaggtgctggagcacccgcgggtcggt
gaattcgacttctcctcgctgcggatgtcgggcgccatttccttcatcaagaagctgaca
cccagctaccgccggcgctggcgcgagctgaccggcaccacgctggtggaaaccagcttc
ggcatgaccgagacccacacctgcgacaccttcatcgtcggcttccagcaggacgatttc
gacctcaacagcgcgccgaccttcgtcggcctgccggtgccgggcaccgacttcaaggtc
tgcgatttcgagaccggcgagctgctgcccctgggcgcggaaggcgagctgtgcatccgc
agcccgtcgctgctcaagggctactggaaccgccccgaggccagcgccgaggcgctgcgc
gacggctggctgcataccggcgacctcggccagatcaccgagctgggcttcatccgctac
ctgggccggcgcaaggagatgatcaaggtgaacggcatgagcgtgttccccagcgagctg
gaggcgctgctcggccagcacccggcggtgctcgccagcgcggtgctggcccgccccgac
gcgcgccgcggccagcagccggtggccttcgtggtgctcaagccgggcgccggcgaaagc
gccgagagcctgctcgcctggtgccgcgaggccatggccgtctacaaggtgccggaggtc
cgcatggtcgcaagcctgccgatgaccgccaccggcaagatcaagaagaacgaactggag
cctctgctgtga
DBGET
integrated database retrieval system
