Pseudomonas citronellolis: PcP3B5_55390
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Entry
PcP3B5_55390 CDS
T04637
Symbol
lrpC_2
Name
(GenBank) HTH-type transcriptional regulator LrpC
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pcq
Pseudomonas citronellolis
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcq03000
]
PcP3B5_55390 (lrpC_2)
03036 Chromosome and associated proteins [BR:
pcq03036
]
PcP3B5_55390 (lrpC_2)
Transcription factors [BR:
pcq03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PcP3B5_55390 (lrpC_2)
Chromosome and associated proteins [BR:
pcq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PcP3B5_55390 (lrpC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
HTH_AsnC-type
AsnC_trans_reg
MarR
MarR_2
HTH_20
HTH_Tnp_ISL3
HTH_1
HVO_A0114
HTH_IclR
HTH_11
TrmB
Fe_dep_repress
NirdL-like_HTH
HTH_5
LexA_DNA_bind
HTH_9
WHD_DprA
HTH_Crp_2
HTH_23
HTH_28
HTH_Cmi2_C
Rrf2
HTH_PafC
HTH_38
HTH_Mga
HemN_C
Saccharop_dh_N
PCI
HTH_29
FeoC
Motif
Other DBs
NCBI-ProteinID:
AMO78908
UniProt:
A0AAQ1QXU6
LinkDB
All DBs
Position
6143273..6143719
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AA seq
148 aa
AA seq
DB search
MDKYDRALLAALLENGRLSFAELARRINLSPPAVADRVARLEADGVITGYHASVDLTKLG
RPIQCLIELRLNDHRGALQLQRLTEIPQVLDCYRVTGESCVMLRVTVTSTAELEELIDQL
AQHGASKTSLVLSTALDGRVHPAMLQGG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatacgaccgcgcactgctcgccgccctgctggaaaacggccgcctgtccttc
gccgaactggcccggcgcatcaacctctcgcccccggcagtggccgaccgcgtggcgcgc
ctggaggccgacggcgtgatcaccggctaccacgccagcgtagacctgaccaagctcggc
cgcccgatccagtgcctgatcgaactgcgcctgaacgaccaccgcggcgccctgcaactg
caacgcctgacggaaatcccccaggtgctcgactgctaccgggtgaccggcgaatcctgc
gtgatgctgcgggtgacggtgaccagcaccgccgagctggaagaactgatcgaccagttg
gcccagcacggggcgagcaagacttcgctggtgctgtccacggcgctggatgggcgggtg
catccggcgatgttgcaggggggatga
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integrated database retrieval system
