KEGG   Pseudomonas citronellolis: PcP3B5_57010
Entry
PcP3B5_57010      CDS       T04637                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
pcq  Pseudomonas citronellolis
Pathway
pcq02024  Quorum sensing
pcq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PcP3B5_57010 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PcP3B5_57010 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcq03019]
    PcP3B5_57010 (hfq)
   03036 Chromosome and associated proteins [BR:pcq03036]
    PcP3B5_57010 (hfq)
Messenger RNA biogenesis [BR:pcq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PcP3B5_57010 (hfq)
Chromosome and associated proteins [BR:pcq03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PcP3B5_57010 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AMO79065
UniProt: A0A127N128
LinkDB
Position
complement(6336574..6336822)
AA seq 82 aa
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVRLPSGDQPAEPGNA
NT seq 249 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacctgaataccctgcgaaaagaacgcgta
ccggtctccatctacctggtgaacggtatcaagctgcaaggtcagatcgaatccttcgac
cagttcgtgattttgctgaagaacactgtcagccagatggtctacaagcacgccatttcc
accgtcgtgcccagccgtccggtgcgtctgcccagcggcgatcaaccggccgagccgggc
aacgcttga

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