KEGG   Pseudomonas citronellolis: PcP3B5_60130
Entry
PcP3B5_60130      CDS       T04637                                 
Symbol
lysA_2
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pcq  Pseudomonas citronellolis
Pathway
pcq00300  Lysine biosynthesis
pcq00470  D-Amino acid metabolism
pcq01100  Metabolic pathways
pcq01110  Biosynthesis of secondary metabolites
pcq01120  Microbial metabolism in diverse environments
pcq01230  Biosynthesis of amino acids
Module
pcq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pcq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PcP3B5_60130 (lysA_2)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PcP3B5_60130 (lysA_2)
Enzymes [BR:pcq01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PcP3B5_60130 (lysA_2)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N Urease_beta
Other DBs
NCBI-ProteinID: AMO79372
UniProt: A0AAW6P0U0
LinkDB
Position
6707396..6708643
AA seq 415 aa
MEAFNVRDGQLFAEGVALSALAERFGTPTYVYSRAHIEQQFRSYTDALQGLPHLVCFAVK
ANSNLAVLNVLARLGSGFDIVSRGELERVLAAGGDPAKVVFSGVGKSRDDMRRALQVGVH
CFNVESAVELERLQEVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIDIDEAEA
IYARAAELPNLEVKGVDCHIGSQLTQLEPFLDALDRLLALVDRLAARGILIRHLDLGGGL
GVRYRDETPPPASDYIRAIRERLGSRQLTLVFEPGRYIVANAGLLLTRVEYLKHTAHKDF
AIIDAAMNDLIRPALYQAWMEVTPVVARAGQKRTYDLVGPICETGDFLAKGRELALEEGD
LLAIRSAGAYGFVMSSNYNTRGRAAEVLVDGERAFEVRRRETVQELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggaggcattcaacgtccgtgacgggcaactgttcgcggaaggtgtggcgttgtcggcg
ctggccgagcgcttcggcacgcccacctacgtctactcgcgcgctcacatcgagcagcag
ttccgctcctataccgatgccctgcagggcctgccgcacttggtctgcttcgcggtcaag
gccaactccaacctggccgtgctgaatgtcctggcgcgcctgggctcgggcttcgacatc
gtctcgcgcggcgagctggaacgcgtgctggccgccggcggcgacccggccaaggtggtg
ttctccggcgtcggcaagagccgcgacgacatgcgccgcgccctgcaagtgggcgtgcac
tgcttcaacgtcgaatccgccgtggagctggaacgcctgcaggaagtggctgcggaactg
ggcgtgaaggcccccgtgtcgctgcgggtgaacccggacgtggacgcccagacccacccc
tacatctccaccgggctgaaagagaacaagttcggcatcgacatcgacgaggccgaggcc
atctacgcccgcgccgccgagctgccgaacctggaagtgaaaggcgtggactgccacatc
ggctcgcagctgacccagctggagcccttcctcgacgccctcgaccgcctgctggcgctg
gtcgaccgcctggccgcgcgcggcatcctgatccgccacctggacctgggcggcggcctc
ggcgtgcgctaccgcgacgaaaccccgccgccggccagcgactacatccgcgccatccgc
gagcgcctgggcagccgccagctgaccctggtgttcgagccgggccgctacatcgtggcc
aacgccggcctgctgctgacccgcgtggagtacctcaagcacaccgcgcacaaggacttc
gccatcatcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gaggtcaccccggtcgtcgcgcgcgcgggccagaaacgtacctacgacctggtcggcccc
atctgcgagaccggcgacttcctcgccaagggccgcgagctggccctggaagaaggcgac
ctgctggcgatccgctcggccggcgcctatggtttcgtcatgagttccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgagcgggccttcgaggtgcgccgccgc
gagaccgtccaggagctttacgccggcgaaagcctgctgccggagtga

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