Pseudomonas citronellolis: PcP3B5_60130
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Entry
PcP3B5_60130 CDS
T04637
Symbol
lysA_2
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq00300
Lysine biosynthesis
pcq00470
D-Amino acid metabolism
pcq01100
Metabolic pathways
pcq01110
Biosynthesis of secondary metabolites
pcq01120
Microbial metabolism in diverse environments
pcq01230
Biosynthesis of amino acids
Module
pcq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PcP3B5_60130 (lysA_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PcP3B5_60130 (lysA_2)
Enzymes [BR:
pcq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PcP3B5_60130 (lysA_2)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Urease_beta
Motif
Other DBs
NCBI-ProteinID:
AMO79372
UniProt:
A0AAW6P0U0
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Position
6707396..6708643
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AA seq
415 aa
AA seq
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MEAFNVRDGQLFAEGVALSALAERFGTPTYVYSRAHIEQQFRSYTDALQGLPHLVCFAVK
ANSNLAVLNVLARLGSGFDIVSRGELERVLAAGGDPAKVVFSGVGKSRDDMRRALQVGVH
CFNVESAVELERLQEVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIDIDEAEA
IYARAAELPNLEVKGVDCHIGSQLTQLEPFLDALDRLLALVDRLAARGILIRHLDLGGGL
GVRYRDETPPPASDYIRAIRERLGSRQLTLVFEPGRYIVANAGLLLTRVEYLKHTAHKDF
AIIDAAMNDLIRPALYQAWMEVTPVVARAGQKRTYDLVGPICETGDFLAKGRELALEEGD
LLAIRSAGAYGFVMSSNYNTRGRAAEVLVDGERAFEVRRRETVQELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggcattcaacgtccgtgacgggcaactgttcgcggaaggtgtggcgttgtcggcg
ctggccgagcgcttcggcacgcccacctacgtctactcgcgcgctcacatcgagcagcag
ttccgctcctataccgatgccctgcagggcctgccgcacttggtctgcttcgcggtcaag
gccaactccaacctggccgtgctgaatgtcctggcgcgcctgggctcgggcttcgacatc
gtctcgcgcggcgagctggaacgcgtgctggccgccggcggcgacccggccaaggtggtg
ttctccggcgtcggcaagagccgcgacgacatgcgccgcgccctgcaagtgggcgtgcac
tgcttcaacgtcgaatccgccgtggagctggaacgcctgcaggaagtggctgcggaactg
ggcgtgaaggcccccgtgtcgctgcgggtgaacccggacgtggacgcccagacccacccc
tacatctccaccgggctgaaagagaacaagttcggcatcgacatcgacgaggccgaggcc
atctacgcccgcgccgccgagctgccgaacctggaagtgaaaggcgtggactgccacatc
ggctcgcagctgacccagctggagcccttcctcgacgccctcgaccgcctgctggcgctg
gtcgaccgcctggccgcgcgcggcatcctgatccgccacctggacctgggcggcggcctc
ggcgtgcgctaccgcgacgaaaccccgccgccggccagcgactacatccgcgccatccgc
gagcgcctgggcagccgccagctgaccctggtgttcgagccgggccgctacatcgtggcc
aacgccggcctgctgctgacccgcgtggagtacctcaagcacaccgcgcacaaggacttc
gccatcatcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gaggtcaccccggtcgtcgcgcgcgcgggccagaaacgtacctacgacctggtcggcccc
atctgcgagaccggcgacttcctcgccaagggccgcgagctggccctggaagaaggcgac
ctgctggcgatccgctcggccggcgcctatggtttcgtcatgagttccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgagcgggccttcgaggtgcgccgccgc
gagaccgtccaggagctttacgccggcgaaagcctgctgccggagtga
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