KEGG   Pseudomonas citronellolis: PcP3B5_60140
Entry
PcP3B5_60140      CDS       T04637                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pcq  Pseudomonas citronellolis
Pathway
pcq00300  Lysine biosynthesis
pcq00470  D-Amino acid metabolism
pcq01100  Metabolic pathways
pcq01110  Biosynthesis of secondary metabolites
pcq01120  Microbial metabolism in diverse environments
pcq01230  Biosynthesis of amino acids
Module
pcq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pcq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PcP3B5_60140 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PcP3B5_60140 (dapF)
Enzymes [BR:pcq01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PcP3B5_60140 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF D-ser_dehydrat
Other DBs
NCBI-ProteinID: AMO79373
LinkDB
Position
6708654..6709484
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHVLPRHVKSWGDRNTGVGFDQLLIVEPPGSPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTMKKTIRVETKGGIIELSVANDGQVTVDM
GAPRLAPEQVPFVADAEATSYAVEVDGQTVELAAVSMGNPHGVLRVDDVDSAPVRTLGPK
LEVHPRFPAKANIGFLQVLDANHARLRVWERGVGETLACGTGACAAAVAGIRQGWLRSPV
QIDLPGGRLNIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctactgcgcttcaccaagatgcacgggctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcccacgtgctgccccgccacgtcaagagctggggcgaccgcaacacc
ggcgtcggcttcgaccagttgctgatcgtcgagccgccgggtagccccgaggtcgacttc
cgctaccgcatcttcaacgccgacggcagcgaagtggaacagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccatgaagaagaccatccgcgtcgag
accaagggcggcatcatcgagctcagcgtcgccaacgacggccaggtcaccgtggacatg
ggcgcgccgcgcctggcgccggaacaggtgcccttcgtcgccgacgccgaagccaccagc
tacgccgtggaagtcgacgggcagaccgtcgagctggccgccgtctccatgggcaacccc
catggcgtgctgcgggtggacgacgtcgacagcgccccggtgcgcaccctcggcccgaag
ctggaagtgcacccgcgcttcccggccaaggccaacatcggcttcctccaggtactcgac
gccaaccatgcgcgcctgcgcgtgtgggagcgcggcgtcggcgagaccctggcctgcggc
accggcgcctgcgccgccgcggtggccggcatccgccagggctggctgcgctcgccggtg
cagatcgacctgccgggcggccgcctgaacatcgagtgggcaggccccggccagccggtt
atgatgaccgggcccgccgtgcgggtgtacgaaggccaggtccgcctgtaa

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