Pseudomonas citronellolis: PcP3B5_60610
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Entry
PcP3B5_60610 CDS
T04637
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PcP3B5_60610 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcq03400
]
PcP3B5_60610 (exoA)
Enzymes [BR:
pcq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PcP3B5_60610 (exoA)
DNA repair and recombination proteins [BR:
pcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PcP3B5_60610 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AMO79420
LinkDB
All DBs
Position
6760572..6761351
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSYQLDGYFLYACDA
EVPSQGGVAIYSRLQPKAVISGLGFEMADRYGRYLQADFDKVSIASILLPSGQEGDENLN
QKFKFMEDFAAYLNKQRRKRREYIYCGSLYLAHNKLDVKNWRECQQMPGFLAPERGWMDE
VFGNMGYVDALREVNREGDQYSWWPDSEQAEMLNLGWRFDYQILTPGLRRFVRNAKLPRQ
PRFSRHAPLIIDYDWTLSI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtgaatggtattcaggctgcagccgagcggggattgctc
agctggttgcaagcccagaatgccgacgtgatctgcttgcaggatacccgcgcctccgct
ttcgatctggacgacccgtcctaccagctggacggctacttcctgtacgcctgcgacgcc
gaagtgcccagccagggtggcgtcgcaatctatagtcgtctgcaacccaaggccgtcata
agcgggctgggtttcgagatggccgatcgttacgggcgctacctgcaagccgatttcgat
aaggtgagtattgccagcattcttctgccgagcgggcaggagggtgacgagaacctgaac
cagaagttcaagttcatggaagacttcgccgcctacctgaacaagcagcgccgcaagcgc
cgcgagtacatctattgtgggtcgctgtacctggcccacaacaagctggacgtgaagaac
tggcgcgaatgccagcagatgcccggcttcctcgcgcccgagcgcggctggatggacgag
gtgttcggcaacatgggctacgtcgatgccctgcgcgaggtcaaccgcgaaggcgaccag
tacagctggtggccggacagcgagcaggccgaaatgctgaacctgggctggcgcttcgac
taccagatcctcaccccgggtctgcgccgcttcgtgcgcaacgccaagctgccgcggcag
ccgcgcttctcgcgccacgcgccgctgatcatcgactacgactggacgctcagtatttga
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