Psychrobacter cryohalolentis: Pcryo_0076
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Entry
Pcryo_0076 CDS
T00350
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcr
Psychrobacter cryohalolentis
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcr03016
]
Pcryo_0076
Enzymes [BR:
pcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pcryo_0076
Transfer RNA biogenesis [BR:
pcr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pcryo_0076
Prokaryotic type
Pcryo_0076
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
SipA
DKCLD
DUF3458
Motif
Other DBs
NCBI-ProteinID:
ABE73860
UniProt:
Q1QEP3
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All DBs
Position
87911..88990
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AA seq
359 aa
AA seq
DB search
MSIASTQADKKSSNHPNKIKVSGVILVDKPQGMTSQQVVSKVKYLFKSPNHDSKKAGHTG
TLDPMATGLLPICLGEATKFSHYQLDADKSYQATILLGSQTDTGDADGQVTAEAPIPAFD
DALLDKVAQQFLGAQQQIPPMYSALKKDGKKLYEYARAGIEVDRPPRDIVLKAIELKAID
EQQIQLTVTCSKGTYVRVLAEDIAKAMGTLGHLTALRRLQVGDFKIDETIALADLEALPL
EQRQTYLLPVDACIDISAELSLSSEQCERVQMGQRLNVIDQLTDDVQSYITTAIDQHLAA
NNNSAADSQNIEDTNDDNEQQLVHEIPIDIRLIDEQGAFIGLGAVSLNGRLQPKKLIQL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgcatctacgcaagcggataaaaagtctagtaatcaccctaacaagattaaa
gtttctggtgttattttagtcgataagcctcaaggtatgacttctcagcaagtggtttca
aaggtaaaatatttatttaaatcgcctaaccatgacagcaagaaagcaggtcataccggc
acacttgatccaatggcaacaggattattgcctatctgtttgggtgaagcgaccaagttc
agtcactatcagcttgatgcggataaatcttatcaagcaaccattctacttggtagtcaa
actgataccggtgatgccgatgggcaagtcactgctgaggcaccgattccagcgtttgat
gatgcactgttagacaaagtcgctcagcagtttttaggtgcccagcagcaaattccaccg
atgtattctgccttaaaaaaagatggcaaaaaactctatgaatatgctcgtgctggtata
gaagtagaccgcccgccaagagacattgtccttaaagccattgagttaaaagcaatcgat
gagcagcaaatccagttaacagtaacttgttcaaaaggcacttatgtgcgtgtattggca
gaagatattgctaaagcgatgggtacacttggacatttaacggcattgcgccgtctacaa
gtgggtgattttaaaatcgatgagacaattgcgcttgcagatttagaagcattgccatta
gaacaacgtcagacatatctattgccagtagatgcctgcattgatattagtgctgagctg
tcactatcgtcagagcagtgcgagcgcgtacaaatgggtcaacgcttgaatgttatcgat
cagttgactgatgatgtgcaaagttatatcacaacagctatcgatcagcatttagctgct
aacaataacagcgctgctgatagtcaaaatatagaagatactaacgatgataacgagcag
caattggtacatgaaataccgatagatattcgtcttattgatgagcagggtgcgtttatt
ggtttaggggcagtgagcttaaatggtcgattgcaacctaaaaagctgattcagttgtaa
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