Psychrobacter cryohalolentis: Pcryo_0419
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Entry
Pcryo_0419 CDS
T00350
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03030
DNA replication
pcr03410
Base excision repair
pcr03420
Nucleotide excision repair
pcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pcryo_0419
03410 Base excision repair
Pcryo_0419
03420 Nucleotide excision repair
Pcryo_0419
03440 Homologous recombination
Pcryo_0419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcr03032
]
Pcryo_0419
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_0419
Enzymes [BR:
pcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pcryo_0419
DNA replication proteins [BR:
pcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pcryo_0419
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pcryo_0419
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pcryo_0419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
ABE74202
UniProt:
Q1QDQ1
LinkDB
All DBs
Position
complement(508432..511398)
Genome browser
AA seq
988 aa
AA seq
DB search
MTANDHNSHSPINPNTLPNFATMPNVATMDTTHVDKNQPPFILVDGSYYLFRTYHALPKT
MQNSQGLVTNAIRGTLNALLKLMRRYHPTHMAVCFDTKSPTFRHAMSEEYKANRPKMDIE
LAEQIPYIHRLVTALGIPLLRIEGAEADDIIGTLAYRAVAEGHHVVISTGDKDMMQLIND
CVILEDSFTGKMTDSAGVVEKFGINPEQMIDFLTLMGDSSDGIKGVPGIGKKTAKDLLNE
YGNIDNMLKNVANIKGRAGKNLLEYADDIPMNAQLATIVTDLEVGQDWQDLKINTDPCAH
INELRELYSELEFRNELASLDHPNHPANGNGHGTQSVAHSQADAESQAQIAKSLQSSTIG
DITDSKIHDRAWHTILDESAFDNLVQLLASAPHFVIDTETTSVYWRQAELVGLSFAVQAH
EAYYIPLTHALEGDELIAKQLDRDTVLARLKPILENPNIGKIGQHLKYDAHILSLYDINL
LGNIHDKPNNWAMDTMLASYVINAAITRHGMDDLARHYLQTQTISFEDVAGKGAKQVSFD
QVAIDIASDYACEDADITYQLFDLFSKKLADDTNNAKLLHELEIPTAEILCQMEANGILI
RRPFLNELSKRFDEEIIALEKRAYEVAGEEFNLGSPKQLGEMLFDKLGVVGGKKTKTGQY
STGEAVLSKIDHPLVDITLEYRGLSKLKSTYTDALDNVADAKTDRVHTSYHQALTSTGRL
SSTDPNLQNIPIRTATGRLIRQAFIAPEGRVILAADYSQIELRLMAHFSGDKNLTHAFNE
GLDIHAATAAEVLGKEVAEVTATERRNAKAINFGLLYGMSAFGLAKQLQMSRSEAQDYID
MYFERYPGVKDYMINTRASAYEHGYIETILGRKLYTPDINHSNRMVKQGAERAAINAPLQ
GSAADLIKLAMIAVDKVLPKEQAKMLLQVHDELVFEVDADKVDEISQLITNAMQDVLTAT
AVEKGWNVNFAVPLLVETDSGQNWDEAH
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaacgatcacaactcccactcgcctattaatcccaatacgctaccgaatttt
gcaacgatgcccaatgtggcgacaatggacaccacgcatgtggacaaaaaccagccacct
tttatcttggtcgatggctcttactatctgtttcgtacctatcatgcgctgccaaaaacc
atgcagaattcgcaagggctagtcaccaatgcaatacgtggcacgctcaatgcactttta
aagctgatgcgccgttatcacccaacccatatggccgtttgttttgataccaagtcaccg
acctttcgtcatgctatgtcagaagagtacaaagccaatcgtccaaaaatggatatcgag
cttgccgagcagattccttatattcatcgtttggtcactgcgcttgggattccactgtta
cgtatcgaaggcgcagaagcggacgatattatcggtacgctcgcctatcgtgcagttgcc
gaagggcatcatgtggttatctcaactggagataaagatatgatgcagctgattaatgac
tgcgtaatactagaagatagcttcacaggcaagatgactgatagcgctggcgtggttgaa
aaattcggtatcaatcctgaacagatgattgattttttaactttgatgggcgattcctct
gacggtatcaaaggcgtacccggtattggtaaaaagaccgccaaagatttgctcaatgaa
tatggcaatatcgataatatgctcaaaaatgtcgccaatatcaaagggcgtgctggcaaa
aacttgctcgaatatgccgatgatattccgatgaacgcgcagctggcaaccattgttact
gatttagaagtggggcaagactggcaagatttaaaaataaacactgatccttgcgcccac
atcaatgagctacgtgagctatatagtgagctcgaatttagaaatgagttagcgtcactt
gatcaccctaatcatcctgccaatggtaatgggcatggcacgcaaagtgttgctcatagt
caggctgatgctgagtcacaagcgcaaatcgctaaatccctacaatcaagcaccatcggt
gatattaccgatagcaaaattcatgatagagcatggcatactattttagacgagtctgcc
tttgacaacttagttcaattgttagcatctgcgccgcatttcgttatcgataccgaaacc
acgagtgtctattggcgtcaggctgaattggttggcttgtcttttgctgtgcaagcacac
gaagcttattatattccgctgactcatgcgctagaaggcgatgaattaatagcaaaacag
ctcgaccgcgataccgttttggcgcgtttaaagcctattttagaaaacccaaacatcggt
aaaattggtcaacatttaaagtatgatgcccatattcttagcctttatgatataaacctc
ttaggcaatattcatgacaagcccaacaattgggcgatggatactatgcttgccagctat
gtgattaatgctgccattacccgtcatggtatggatgatttagcacggcattacctgcaa
acgcagaccatcagctttgaagatgtcgctggtaaaggcgctaagcaagtgagtttcgat
caagtagcgattgatattgctagcgactatgcgtgtgaagatgccgatattacttatcag
ttgtttgatttgtttagcaaaaaacttgctgatgataccaataacgctaagctgctacac
gagctagaaatcccaacagcggaaatactgtgccaaatggaagcaaacggtatcttaatt
aggcgtccgtttttaaacgagctatctaaacgctttgatgaagaaatcattgccctagaa
aaacgtgcgtacgaagtcgccggtgaagagtttaatcttggctctcctaagcagcttggc
gagatgttattcgataaacttggcgtcgtgggtggcaaaaaaaccaaaactggtcaatat
tctaccggtgaagccgtcttatcaaaaatcgaccatcctttggtcgatatcaccctagag
tatcgcggactctctaaacttaagagcacctataccgatgcgcttgataatgtagcagat
gccaagactgaccgtgtgcataccagctatcatcaagcattgaccagtactgggcgctta
tcttcgactgatcccaatttacaaaatattcctattcgtaccgctactggtcgcttgatt
cgtcaagcatttattgcgccagaaggtcgagtcatattagcggcggattattcgcaaatt
gagctgcgtttgatggcgcatttctcaggtgataaaaatctaactcatgcctttaatgaa
gggctagatattcatgccgccactgccgccgaagtactaggaaaagaggtcgcagaggtt
acagcaaccgagcgccgtaatgccaaagccattaactttggtctgctatatggcatgagc
gcctttggactagccaaacagttacagatgagccgtagtgaggcgcaagactacattgac
atgtattttgagcgctatcctggcgtcaaagactatatgatcaatactcgtgccagcgct
tatgagcatggctatatcgagacgatattgggtcgtaagctttatacccctgatatcaat
cacagcaatcgcatggtcaaacaaggcgctgaacgggcagcgattaacgcgccattacaa
ggttctgcagctgacttgattaagcttgcaatgattgccgtcgacaaagtattacctaaa
gagcaggcaaaaatgctactgcaagtacatgatgagctagtgttcgaagtcgatgctgac
aaggtcgatgagataagccaattgattactaatgctatgcaagatgtcttgacagcaaca
gcagttgaaaaaggctggaacgtcaattttgcagtgccgctattggttgagacggatagt
ggtcagaattgggatgaggcgcattga
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