Psychrobacter cryohalolentis: Pcryo_0509
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Entry
Pcryo_0509 CDS
T00350
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pcryo_0509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcr03021
]
Pcryo_0509
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_0509
Enzymes [BR:
pcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pcryo_0509
Transcription machinery [BR:
pcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pcryo_0509
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pcryo_0509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7219
Motif
Other DBs
NCBI-ProteinID:
ABE74292
UniProt:
Q1QDG1
LinkDB
All DBs
Position
605553..606560
Genome browser
AA seq
335 aa
AA seq
DB search
MMLNATEFLTPNAINVDTVNETIAKVTLEPLERGFGHTLGNALRRILLSSLPGAAVIEAE
IDGVDHEYSTLEGLQEDVLDLLLNLKGLAITLHDQNEVFLTLDKQGPGTITAADITLPHN
VDIINPELVLGTLSDRGHLKMRLRVVMGRGYEPANQRREDGDTKAIGRLKLDASFSPVLR
VAYQVENARVEQRTDLDRLIIELETNGTIDPEEAIRKAATILQQQISIFVDLEAEEAPEP
VKEKEEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLVQRSETELLKTPNLGKKSLTE
IKDVLASKDLELGMRLDNWPPADLRVDDRFSYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaaatgcaactgagtttctaacgccgaacgccatcaacgtggatacggttaat
gaaacgattgcgaaagtcacgctcgaaccgttagaacgcggctttgggcataccttgggt
aatgccttacgtcgcatcttgttatcttcattacctggtgctgcagtcattgaagctgag
attgatggtgttgaccatgaatactcaacgcttgaaggactacaagaagatgtgcttgat
ttgcttttgaacttaaaaggcttagcaatcacccttcatgaccaaaatgaagtatttttg
accttggataaacaaggtccaggcactattactgctgcagacattacgttaccgcacaat
gtagacatcatcaatccagaattggtattgggtacattgagtgaccgtggtcatctaaag
atgcgtttgcgcgtagtaatgggtcgtggatatgagccagcaaaccagcgccgtgaagat
ggtgatactaaagcgattggacgcttgaagcttgatgcaagttttagtcctgtgcttcgt
gttgcttatcaggttgagaacgcacgtgtagaacaacgtaccgatcttgatcgtcttatc
attgagcttgaaacaaatggcactatagatccagaagaagcaattcgtaaagcagccact
atattacaacaacagatttctatctttgttgacctagaagctgaagaagcgcctgagcct
gtgaaagaaaaagaagaggttgatccggtgctattacgccctgtggacgatcttgaacta
acggttcgctcagccaactgcttaaaagctgaaaacatttactatatcggtgatttggta
cagcgttcagagactgaacttctaaaaaccccaaatcttggtaagaaatcattgacagaa
atcaaagacgtactagcgtctaaagatttggagcttggtatgcgcctagataactggcca
ccagctgatttacgtgttgatgatcgcttttcttatcgtagccgttaa
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