Psychrobacter cryohalolentis: Pcryo_0541
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Entry
Pcryo_0541 CDS
T00350
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pcryo_0541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcr03019
]
Pcryo_0541
03110 Chaperones and folding catalysts [BR:
pcr03110
]
Pcryo_0541
03029 Mitochondrial biogenesis [BR:
pcr03029
]
Pcryo_0541
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcr04147
]
Pcryo_0541
Enzymes [BR:
pcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pcryo_0541
Messenger RNA biogenesis [BR:
pcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pcryo_0541
Chaperones and folding catalysts [BR:
pcr03110
]
Heat shock proteins
HSP60 / Chaperonin
Pcryo_0541
Mitochondrial biogenesis [BR:
pcr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pcryo_0541
Exosome [BR:
pcr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pcryo_0541
Exosomal proteins of other body fluids (saliva and urine)
Pcryo_0541
Exosomal proteins of breast cancer cells
Pcryo_0541
Exosomal proteins of colorectal cancer cells
Pcryo_0541
Exosomal proteins of bladder cancer cells
Pcryo_0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABE74324
UniProt:
Q1QDC9
LinkDB
All DBs
Position
638605..640254
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDVKFGIDARKQMMDGVNVLANAVRVTLGPKGRNVVIDKSFGAPTITKDGVSVAKEIE
LENKFENMGAQLVREVASRTNDVAGDGTTTATVLAQSILQEGMKSVAAGMNPMDLKRGID
KAVRAAVEQIHLLSTPADDSKAIAQVGSISANSDTKIGELIAQAMEKVGKQGVITVEEGS
SFEDTLEVVEGMQFDRGYISPYFANKQDSLTAEFENPYILLVDKKISNIREIVPLLEQVM
QQSKPLLIIAEDVENEALATLVVNNMRGGLKTCAVKAPGFGDRRKAMLEDIATLTGGTVI
SEEIGLSLETATLEQLGTAKKVTVGKENTVIVDGAGNSADIENRVESIKRQVEESTSDYD
KEKLQERMAKLAGGVAVIKVGAATETEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVR
AMNALSELRGDNDDQNAGINILRRAMEAPLRQIVTNSGEEASVVVNEVKSGTGNYGYNAA
SGEYGDMLEMGILDPAKVARSALENAASVAGLMLTTEVMITDLPQGDDGMAGMGGAGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacgtaaaattcggcatagatgcccgtaaacaaatgatggacggcgtgaac
gttctagcaaacgcagtacgagtcacactaggccctaaaggtcgtaacgtggtaatcgat
aagtcgtttggcgcacctactattactaaagatggtgtttcagttgctaaagaaatcgag
cttgaaaacaaatttgaaaacatgggcgcgcaattggttcgtgaagtcgctagccgtacc
aacgatgttgctggtgatggtacgactactgcgacggtattggctcagtcaatcttgcaa
gaaggcatgaaatcagttgccgctggcatgaacccaatggatctaaaacgcggtatcgat
aaagcggtacgtgcagctgttgagcaaatccatttgctatctaccccagctgacgattca
aaagcgattgctcaagttggttctatctctgccaactcagacaccaaaatcggtgaattg
attgctcaagcgatggaaaaagtcggtaagcaaggcgttatcaccgttgaagaaggttca
agctttgaagataccctagaagttgtcgaaggtatgcagtttgatcgtggttatatcagc
ccgtactttgcaaataagcaagacagcttaactgctgagtttgaaaacccatatatctta
ttggttgataaaaaaatcagcaatatccgtgaaatcgtgccattacttgagcaagtcatg
cagcaaagcaagccattgctaatcatcgctgaagacgtagaaaacgaagcattggcgaca
ttggttgtcaacaacatgcgtggcggcttaaaaacttgtgccgttaaagcacccggtttt
ggcgatcgtcgtaaagcgatgttagaagatatcgcaacgctaactggcggtacggttatc
tctgaagagattggtctaagtttagagactgctactttagagcaacttggtacggctaaa
aaagtcactgtcggtaaagaaaacaccgttatcgttgatggcgctggcaactctgcggat
atcgaaaaccgtgttgaatctatcaaacgtcaagtagaagaatcaacgtctgactacgat
aaagaaaagcttcaagagcgtatggctaaactggctggcggcgttgccgttatcaaagtt
ggcgctgcgactgaaactgaaatgaaagagaagaaagaccgtgttgatgatgcgttacat
gccactcgtgcagcggttgaagaaggcgttgtccctggtggcggtgttgcgctagttcgt
gccatgaatgcattgtctgagctacgcggtgataatgacgaccaaaacgctggtatcaat
atcttacgtcgcgcaatggaagcaccattacgtcaaatcgtgaccaactctggcgaagaa
gcttcagtggtagtaaatgaagtgaagagcggtactggtaactacggttacaacgcagct
tctggcgaatatggcgatatgctagagatgggtattcttgatccagccaaagtagcacgt
tcagcgctagaaaacgcagcatctgttgccggtctaatgctaaccactgaagtcatgatt
actgatttaccgcaaggcgatgacggtatggctggcatgggcggtgctggtggaatgggc
ggtatgggtggaatgggcggtatgatgtaa
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