Psychrobacter cryohalolentis: Pcryo_0837
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Entry
Pcryo_0837 CDS
T00350
Name
(GenBank) DNA topoisomerase, type I, putative
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcr
Psychrobacter cryohalolentis
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcr03032
]
Pcryo_0837
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_0837
Enzymes [BR:
pcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pcryo_0837
DNA replication proteins [BR:
pcr03032
]
Prokaryotic type
DNA Topoisomerases
Pcryo_0837
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pcryo_0837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABE74620
UniProt:
Q1QCI3
LinkDB
All DBs
Position
989865..990992
Genome browser
AA seq
375 aa
AA seq
DB search
MAKSNQPTNIQDVRHDYEHLASLANLRYVSDTDPGYGRRRSGRGFTYRDATGKTVKDKAL
RQRFDALVIPPMWSEVWICQDDKGHLQSTGRDDKARKQYLYHSEWDRVRDQAKFNAMIGF
AEALPNLRAQVEKDLEAKPLSRDNVLAAVVKLLETTLIRIGNSRYAKLNKSYGLSTLRSK
HVSETDTGLAFDFVGKSAKEHHIELQDERLIDIIQACSELPGYQVFKYLDEEGNKQVVDS
ADINDYLRTHTCGNECESYSGNLYSAKDFRTWMASVLAASYLYDELQTKSGKLILASALD
SKERQQLVTDMVKSVADELGNTPTVCRSSYINPIIIQQFLAGEFFEPYKQARRGRTKRHQ
SCEEKALLGFLSARQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtcaaatcaaccaaccaatatacaagatgtgcgccatgattatgagcacttg
gcgagcctcgcaaacttacgttatgtcagcgataccgatcctggatatgggcgtcggcgt
tctgggcgtggctttacttatcgagatgccactggcaaaacggtcaaagataaagccttg
cgtcagcgctttgatgctttagtcataccgccgatgtggtcagaagtttggatatgccaa
gatgataaaggacatctacaatcgacaggtcgagatgataaagcgcgtaagcagtattta
tatcattcagagtgggatcgggtacgtgaccaagccaagtttaatgccatgataggtttt
gctgaagcattgcccaatctgcgtgcgcaagttgaaaaagatttagaagccaaaccctta
tcacgtgacaatgtgttggcagcagtggtcaaattacttgagaccactttgattcgtatc
ggtaatagtcgttacgccaagctcaataaaagttatggtttaagcacgttacgcagtaag
catgtcagcgaaacggatactggactggcatttgactttgtcggtaaaagtgccaaagag
catcatatagaattgcaagatgagcgtttgattgacatcatccaagcgtgctctgagctg
cccggttatcaagtattcaaatacttagatgaagagggcaataagcaagtcgttgatagc
gctgatatcaatgattatctgcgtacgcatacctgtggtaatgagtgtgaaagttatagc
ggcaatttatacagtgcaaaagactttcgtacttggatggcaagtgtattggcagcaagc
tacctttatgatgagctgcaaaccaaatctggtaaattgattttagccagtgcgctcgat
agtaaagagcgtcagcaactggtgactgatatggtaaaaagcgtcgccgatgagctcggc
aataccccaacggtctgtcgatcctcttatatcaatcctattattatccagcagttttta
gcaggggagttttttgagccttataaacaagcgcgccgtggacgtaccaaacggcatcaa
agctgtgaagagaaggcgttacttgggtttttgagcgcgcgacagtaa
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