Psychrobacter cryohalolentis: Pcryo_1017
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Entry
Pcryo_1017 CDS
T00350
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03420
Nucleotide excision repair
pcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pcryo_1017
03430 Mismatch repair
Pcryo_1017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_1017
Enzymes [BR:
pcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pcryo_1017
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pcryo_1017
MMR (mismatch excision repair)
Other MMR factors
Pcryo_1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ABE74798
UniProt:
Q1QC05
LinkDB
All DBs
Position
1216556..1218757
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AA seq
733 aa
AA seq
DB search
MTTTIFATHHYNYPQNFIEMKPKITRLKQAIKKLEANLINADAEVLAQRLASHLGLQVDY
ASELNANQLLAATTIEGKVLVIAGAGSGKTKTLTYRTSYLIENGVSPKEILLLTFTRKAA
NEIKGRARALLASTPSFAQRLNEDLVEDKLPKNKALNDITSGTFHSFCNMLLRQYSGLLG
INPRFTILDTGDSEDAIDLIHKEKKYPTKITNQAFPRKKTLQNIFSTSRNRRIHIRDLIE
NSYPDIAVHIPVIEQLAIDFHEYKRANHLYDFDDIISQVVRHLKHNDTFRQLLQNQYRYI
MVDEYQDTNIPQKELIDLICAPTSVSLMVVGDDNQSIYAFRGANYENILLFGEGYPEAKL
IKLEQNYRSTPAVLDYINALSAQITLGYQKQLYSGVSIEGVKPIFRRLSDESREAKYIAD
RIIELKPDHDYQDFAVLCRTSFQSNYVQLEFMERNIPFIVVGGIRFIERRHIKDVLAFVK
ILYNPNDTIAWHRILTLFKGVGSVTATRLTQAINADDNSFEPLLTTKFAKKSTQLEPLYK
MLSQASQAESVEAIIELILDFYMPVLKINEDNWRERSEDFRVLKNLALEHDSLDKFLENL
ALDPPNDSVATAGEPEKGEEGIDKNRNKVTISTIHSAKGLEWPVVFVNSLVDGMTPHYRS
LSDFEELEEERKLFYVACSRAKSRLFLTAPDYFSSYSGYFDKVSRFIAEVPADKITVLTV
KQPLEESDDPVWW
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccatttttgctacccaccattataattatccgcaaaattttatcgagatg
aaacccaagatcacgcggcttaagcaggcaattaagaagctcgaagccaatctgataaat
gcggatgctgaggtattagcgcaaaggcttgccagtcatttagggttgcaagtagattat
gccagtgagcttaatgccaatcagctattggccgccacgactattgagggcaaggtattg
gtgatcgccggtgccggttctggcaaaaccaaaactctgacttatagaaccagttacttg
atagaaaatggcgtgtcgccaaaagagattttactattaacctttactcgtaaagcagcc
aacgaaatcaaaggtcgtgctagagctttgctagcaagcacaccatcttttgcccaaagg
ttaaatgaggatttggtagaagataaattgccaaaaaataaagccctgaatgacattacc
agtggcaccttccattctttttgtaatatgctattgcgtcagtactcaggtctgcttggt
attaatccgagatttaccattctagatacaggcgacagtgaagacgctatcgatttaatt
cataaggaaaaaaagtatccgaccaaaataaccaatcaggcatttccgcgcaaaaaaacg
ttgcaaaacatattttcaacctctagaaatcgccgtattcatatccgcgatttaatcgaa
aacagctatcctgatattgctgtccatattcctgttattgaacaattggccattgacttt
catgagtataagcgtgccaatcatttatacgattttgatgacatcattagccaagtggtg
cgtcatttaaagcataatgatacttttcgtcagctattacaaaatcaatatcgctatatc
atggtcgatgaatatcaagacaccaatattccgcaaaaagagctgattgatctcatctgt
gcgcctacgtcagtgtcgctgatggtcgtcggtgatgacaaccaaagtatttatgccttt
cgcggcgccaattatgaaaatatcttattattcggagagggttaccctgaagctaagctg
attaaacttgagcaaaactatcgtagtacgccagcagtgcttgattatatcaatgctctg
tctgctcagatcaccttgggttaccaaaagcagctgtactctggggtttctatagaaggc
gtaaaaccaatatttcgccgacttagcgatgaaagccgcgaggcaaagtatattgctgat
agaattatcgaattaaaaccagaccatgattatcaagactttgcggtattgtgccgaacc
tcctttcaatccaactacgtccagctagaattcatggagcgcaatatcccgtttattgtc
gtaggcggtattcgttttattgaaagacgccatatcaaagacgtcttagcatttgtcaaa
atactttataacccgaatgataccattgcatggcaccgtattttgaccttatttaaaggc
gtggggtcggtaactgccacgcgcttaacccaagcaatcaatgctgacgataactctttt
gagccgttattaacaacaaagtttgccaaaaaaagcacgcaacttgagccgctgtataaa
atgctaagtcaagccagtcaagcagagtcggtcgaagccattatcgagctgattctagat
ttttatatgcccgttttaaaaatcaatgaagacaattggcgtgagcgtagcgaagatttt
cgtgtgctcaaaaatctagcgttagagcatgatagcctagataaatttttagaaaatctg
gcacttgatccacctaatgactcggttgccactgcaggtgagcctgaaaaaggcgaagaa
ggtatcgacaaaaacaggaacaaagtgaccatttcgaccattcatagtgccaaaggactt
gaatggccagtggtatttgttaattcattggtagatggtatgacgccgcattaccgctca
ctaagcgattttgaggaattagaagaggagcgtaagctgttttatgttgcttgtagtcgt
gctaaaagcaggctgtttttaactgcgcccgattatttttcgagctattcaggctatttt
gataaagtgtcacggtttatcgctgaagtacctgctgataagataacggtgctaacggta
aaacagcctttagaagagagtgatgatccagtttggtggtga
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