Psychrobacter cryohalolentis: Pcryo_1214
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Entry
Pcryo_1214 CDS
T00350
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03030
DNA replication
pcr03430
Mismatch repair
pcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pcryo_1214
03430 Mismatch repair
Pcryo_1214
03440 Homologous recombination
Pcryo_1214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcr03032
]
Pcryo_1214
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_1214
Enzymes [BR:
pcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pcryo_1214
DNA replication proteins [BR:
pcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pcryo_1214
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pcryo_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ABE74995
UniProt:
Q1QBF8
LinkDB
All DBs
Position
complement(1468222..1471965)
Genome browser
AA seq
1247 aa
AA seq
DB search
MAFVHLGIHSEYSITDSIVRIKPLVKAAAADNQSALALTDLSNLYATVKFYRACLGAGIK
PIIGSEVIMENEDTRLTLLAMNNEGYQNITRIVSLGFTEGRADPVNHGTPVIKRSHILAH
AAGVIVLFTEKSDVGQALIGSMPEKADELLTEWQAQFADRLYFAIKRTNRTGEDAFIKAA
IHSGAKHHIPIIAHNDVRFLEQDDFDAHEARVCIAGSYVLADQNRPQTYSDAQYLKTQAQ
MEQLFADIPQVIDNTLRLATRCNVSLTLGINVLPEFPVPEGETTESFFRLESQRGLDNRL
DKLFPVDARSDNWSDIRQRYDDRLEYELKVILSMGFPGYFLIVMDFIRWAKANGVPVGPG
RGSGAGSLVAYALNITDLDPIHYDLLFERFLNPERVSMPDFDIDFCIEGRDRVIDYVAQT
YGREAVSQIITFGTMAAKAVVRDVARAQSKSYFLASKMSKLIPKTPGITLSQALEQEPQL
KDLISNPDNMDYEDAIEVWEMAIKLEGICRNVGKHAGGVLIAPHRITDFSAIYCDDEGHR
VSQFDKDDVEAVGLVKFDFLGLRNLTVIDAAVRNINLRRAKEGKDALVLEDLPLDDAKAY
KLLQDAKTTAVFQLESMGMKKYLAKLQPTNIEDVIAMCALYRPGPLDAGMVEMYIDRKHG
REEVIYDHPNLEPILENTNGVIVYQEQVMQISQVMAGYSLGGADMLRRAMGKKKPEEMAK
QRDIFVTGATAQGIDEATSGGVFDLMEKFAGYGFNRSHSAAYGVLAYQTAYLKQYYPAEF
MAAVLTSDMNNTDNVVFFINDCRENFDLTVVNPSVNRSEWHFVADTPTNIIYGLGAIKGV
GEGAVESIVDARRREGPFKDLYDFCRRVDIKKVNKRTLEALVSAGCFDDFAATLRPDLPA
DEAYEIRGALMSQLPSAVQAAEQDRQNREIGMMDLFGEMDGVVAAPPLVMTPELIWGDKH
RLKAEKNTLGLYLTGHPIDEYRDELKRYTSGARLDKLTDTGYNGSCYFAGLIIDIANFGT
RNVITLDDGTSRLEVSCYAERFNRVKEQLKIDEVVIIKGSIRERDGRLFARLDNAMSMVD
ARLRWLKKISIKIHGSDIDLLTRMQPLLKSAQVSMIPAPKTSHNDEQDEQSDNTNNNSFV
GYNASMGGSLYDENGNDLLALENNMAQDAYSNDTDPSLSNKSYANNALSNTDVSINDNCL
PLGLSIYEEYGIANVGLSEHWRIYPNDDNLQQLKSMIREDNLHFHYS
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgtacaccttggcatccacagcgaatattccattaccgattctatcgtgcgt
attaagccgttggttaaagcggcggcggcagacaatcaaagcgcccttgccttgacggat
ctatccaacctgtatgcaacggtgaaattctatcgtgcctgcttaggtgcaggtatcaag
cccattatcggcagcgaagtcatcatggagaatgaagacacgcgcttaactttattggcg
atgaacaacgaaggctatcaaaacatcactcgtatcgtatcgcttggctttaccgaagga
cgtgctgatcctgttaatcacggtactcctgttattaaacgcagccatattttagcgcat
gcggcaggtgtcattgtcttattcactgaaaagtcagacgttgggcaagcattgattggc
tcaatgccagaaaaagccgatgagctactgacagaatggcaagcgcagtttgctgatcgc
ttatattttgcgattaaacgcaccaatcgtactggcgaagatgcctttattaaagctgct
attcattcaggtgctaagcatcatattcctatcattgcccacaatgacgtgcgattttta
gaacaagatgattttgatgctcatgaagcgcgggtttgtattgctggctcttatgtcctt
gctgaccaaaatcgtccgcaaacttattccgatgcccagtacctgaaaacccaagcgcag
atggaacaactatttgctgatattccgcaggtgattgataataccttgcgcttagcaacg
cgctgtaatgtgagcttaacgctaggtattaacgtactaccagagtttccagtacctgag
ggcgaaaccactgaatctttctttcgcttagaatcgcagcgtgggcttgacaatcgttta
gacaagctctttccagttgacgcgcgcagtgataattggagtgatatacgccaaagatac
gatgaccgcttagagtatgagctcaaggttatcttatcaatgggattccccggttacttc
ctgatcgtgatggactttattcgttgggcaaaagccaatggcgtacccgttggacccggt
cgtggttctggtgctggctcactagtcgcttatgcgctcaatattaccgaccttgaccct
attcattacgatctactatttgagcgctttttaaaccctgagcgtgtgtccatgcccgat
ttcgatattgacttttgtatcgaaggtcgcgaccgcgttattgattatgtggcgcaaacc
tatggtcgtgaagcggtttcacagattatcacttttggtaccatggcagcaaaagcagtc
gtacgagatgtcgcacgcgcgcaaagtaaatcttacttccttgccagcaaaatgtctaaa
cttattcccaaaacaccggggatcacactcagtcaagcgcttgagcaagagccacaactc
aaagacttaatttccaatcctgataatatggattatgaagatgccatcgaagtatgggag
atggctatcaagcttgaaggcatttgccggaacgtgggtaaacatgccggcggcgtattg
attgcaccgcacagaatcacggattttagcgccatttattgtgatgatgaaggtcaccgc
gtcagtcagtttgataaagatgacgttgaagccgttgggctggtaaagttcgactttttg
ggtctacgtaacttgaccgtgattgatgctgctgtcagaaatattaacctgcgccgtgct
aaagaaggcaaagatgcgttggtgttagaagacctaccgttagatgatgctaaagcctat
aagttactacaagatgccaaaaccactgccgtctttcagctcgaaagtatgggcatgaaa
aagtatctggcaaaattgcagccaaccaacattgaagacgttatcgccatgtgtgcgctc
tatcgtcccggtccgctagatgcgggtatggtagagatgtatatcgatcgtaagcatggt
cgcgaagaagtgatttatgaccatcctaatcttgaaccgattttagaaaacaccaatggc
gttatcgtttatcaagaacaggttatgcaaatctcgcaggtaatggcaggctatagcttg
ggcggagcggatatgcttcgccgagctatgggtaaaaagaaacctgaagagatggcaaaa
cagcgcgatatttttgttactggcgccactgcgcaaggcattgatgaagcgacatcaggc
ggcgtctttgacttgatggaaaagttcgccggttacggttttaaccgctcgcattctgcc
gcatatggcgtacttgcttatcagaccgcgtatctaaagcagtactaccctgctgagttt
atggcagctgtactcacatcagatatgaacaacaccgataacgtggtgttctttatcaat
gattgccgtgaaaactttgatttaacggtagtcaacccatcggttaatcgtagtgagtgg
cattttgttgctgataccccaaccaatattatttatggcttgggtgcgattaaaggggtc
ggtgaaggcgcggtcgagtctattgtcgatgcacgaagacgtgaaggaccttttaaagat
ctatatgatttttgccgtcgcgttgatattaaaaaggtcaataaacgcacgcttgaagcc
ttggtcagtgctggctgttttgatgactttgcggcgactttacgtccagacttgccagcc
gatgaagcctacgagattcgcggtgcattaatgagtcagctgccaagtgcggtacaggcg
gctgagcaagaccgtcaaaaccgtgaaatcggtatgatggatttgtttggtgaaatggat
ggtgtcgtcgctgccccgccactcgttatgacgccagagctaatttggggtgataaacac
cgcctaaaagcagagaaaaatactctagggctttatttgaccggacatcctatcgatgaa
tatcgagacgagctcaaacgctatacctcaggtgctcgtctcgataaattgactgatacg
ggctataacggcagctgctattttgccggtcttatcattgatatcgccaactttggtact
cgtaacgttattaccttagacgatgggacatcaaggttagaggtcagctgttatgctgag
cgctttaaccgtgtcaaagaacagttaaaaatagatgaagtcgtcatcattaaaggcagc
atccgtgagcgtgatgggcgtttatttgctcgtcttgataatgccatgagtatggtcgat
gctcgcctaagatggctcaaaaaaatcagtattaaaattcatggtagtgatatcgacctg
ctgacacgcatgcagcctttactgaaatcggcacaagtcagcatgattccagcaccaaaa
acatctcataacgatgagcaagacgagcaaagcgacaatactaataacaatagttttgtc
ggttataatgcctcaatgggtggcagtctatatgatgaaaatggtaatgatttgttggca
ttagagaacaatatggcacaagatgcttattcaaatgacactgacccaagcctaagtaac
aaaagctacgccaacaacgctttgagcaacaccgacgtctctatcaatgataattgtcta
ccccttggactcagtatttatgaagaatatggcattgctaatgtaggactgtctgagcat
tggcgcatctatccaaatgatgataatttacagcagctaaaaagcatgattagagaagat
aacttacattttcactacagctaa
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