Psychrobacter cryohalolentis: Pcryo_1292
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Entry
Pcryo_1292 CDS
T00350
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pcr
Psychrobacter cryohalolentis
Pathway
pcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pcryo_1292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_1292
Enzymes [BR:
pcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Pcryo_1292
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pcryo_1292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
NAT10_TcmA_helicase
Herpes_Helicase
SLFN-g3_helicase
UvrD-helicase
PhoH
nSTAND3
AAA_16
ResIII
UvrD_C
NPHP3_N
DUF3902
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABE75073
UniProt:
Q1QB80
LinkDB
All DBs
Position
1576727..1578922
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AA seq
731 aa
AA seq
DB search
MSNNNNKSRAGVSLQESWASNISDYILLRRQQTHLAYNVTEAKANADSKQIDKTEQNGLF
TALFVMLATHLEEGHTVLTIEAAEHEHPIQGQINGELVTLYAWQQQLLEMLATPILALID
IQTVTQQEDDSTAGLSLFILLDIMFGKRAQLWAQLALTNREKEILSKRFDAVAALYQIVK
NTNLNSFIQSIHEHTLFADANSNVNNKNSLSKNNQPIVYQHINEPEADTQNIKITFWLHR
AWQAEFNLAQHINTILNQQITPLEIAIPENLHEQQVMAINVANNNAFSIITGGPGTGKTY
TVAQLVIALQQAAESGGDEHGKIRFSTDSASLALAAPTGKAAQRMQESLQAALDGSNVEL
QLQEAKTIHRLLGIGRTGRPRYNANNPLGEDIIIVDEASMLGVELANYLVSAVKPGARLI
LLGDANQLAAVDAGAVLADLCCIPLLQPIHAKLTESRRFSADSGIGKLANQINKTEADTQ
AIWQLLRQDKALSFQYVNTLQTEIAIDNKIKNSLSNYKILSNLTLSYHQYLNRVESLLKN
PIEKSVPELVKSTITSLMQTFNQFRVLSAGHNGEWGDHYINNHITQWHLTKLKLPLGQNT
WFHGRPVMVLQNNYELGLFNGDIGFCLQTGDGRSRLEVFFENKAQGIAVNLLNEDVIATA
YAMTIHKSQGSEFDHVAITFDNSHARLLSKELIYTAVTRAKKQVTIYSTKHAFEKAVQTP
TERNTGLALQF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataataacaataagagcagagcgggcgttagcttacaagaaagctgggctagt
aacatcagtgattatatattgctgcgccgtcagcaaacgcacttagcgtataacgtcact
gaggcaaaggctaatgctgatagtaagcaaatcgataagacggaacaaaatggcttattt
actgctttattcgttatgttggccactcatttagaagagggacatactgtactcaccatt
gaggcagctgagcatgaacatccaatacaaggtcaaatcaatggcgagctagtcacccta
tatgcctggcagcagcaactattagagatgctagcaacaccaatcctagcactgattgac
attcaaacagttactcagcaagaggatgattctacagctgggttatcattatttatcctg
ctagacatcatgtttggtaagcgagctcagctatgggcacagctagcactcaccaatcgt
gaaaaagagatactcagcaaacgctttgatgcggttgctgcactttatcagatagtgaaa
aacacgaatctgaattccttcattcagtctattcatgagcatactttgttcgctgacgct
aattctaacgtgaataataaaaatagcctaagcaaaaataatcaacctattgtgtatcag
catattaatgaaccagaagctgatacacaaaatattaagatcactttttggttacatcga
gcttggcaagcagaattcaacttagcacagcacatcaatactattttgaaccaacagata
acccctttagagatagcgataccggaaaacctacatgagcagcaggtaatggctattaat
gtcgctaataacaatgcctttagcattattactggtggtcccggtacagggaagacctat
acggttgctcaattagtaattgctctgcaacaagctgcagagagtgggggtgatgagcat
ggaaaaattcggttcagtacagacagtgccagcctagccttagcagcaccgactggtaag
gctgcccagcgaatgcaagagtctttgcaagcggctctagatggatcgaatgtagagcta
caactgcaagaagccaagaccattcatcgcttattaggcattggtcgaacaggtagacca
cgttacaatgcaaataatccactcggcgaagatattatcattgtcgatgaggcatctatg
ttgggggtggaactggctaattaccttgtaagtgcggtaaaaccgggcgcaaggcttata
ttgttaggagatgcgaaccagctagccgcagtagatgctggggcagtattggctgactta
tgctgcattccattgctacaacctatacatgcaaagctaacagagagtcgccgatttagc
gcagactcagggattgggaagcttgccaatcaaattaataagacagaggcagatactcaa
gctatttggcagttgttaaggcaggacaaggcactgagttttcaatatgtaaatacgttg
caaacagagatagctatagataataagataaaaaatagcctaagcaattataaaattctc
tcgaacctcactttaagttatcatcaatacctgaatagagttgaatcactactaaagaat
ccaatagaaaaatccgtgccagaattagtaaaaagtacaattacttcattaatgcaaacg
tttaatcagtttagagtcctaagtgctggtcataatggcgagtggggtgatcactacatt
aataatcatatcactcaatggcatcttactaagctaaagctaccgctaggtcaaaataca
tggtttcatggtcgtcccgttatggttttacaaaacaactatgaacttggattatttaat
ggcgatattggtttttgcttgcaaacaggagatggaagaagccgacttgaggtgttcttt
gagaataaagcacagggaattgctgtcaatctgctaaatgaagacgttatagccacagca
tatgcaatgaccattcataaatcgcaggggtctgagtttgatcatgtggccattactttt
gataatagtcatgcaaggcttttgagcaaagagcttatttatacggcggtaacccgtgct
aaaaaacaggtgacaatatatagtacaaaacatgctttcgaaaaagccgttcagacaccg
actgagcgcaatacgggtttggcattgcagttttag
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