Psychrobacter cryohalolentis: Pcryo_1399
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Entry
Pcryo_1399 CDS
T00350
Name
(GenBank) SMC protein-like protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcr
Psychrobacter cryohalolentis
Brite
KEGG Orthology (KO) [BR:
pcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcr03400
]
Pcryo_1399
DNA repair and recombination proteins [BR:
pcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pcryo_1399
Archaeal homologous recombinant proteins
Pcryo_1399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
nSTAND3
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABE75178
UniProt:
Q1QAX5
LinkDB
All DBs
Position
1711122..1715033
Genome browser
AA seq
1303 aa
AA seq
DB search
MRLIELRLKNLNSLKGEWHIDFSDAAFLNEGIFAITGQTGAGKTTILDAICLALYSQTPR
LGDITGSTNEIMTQGTGECSAEVIIEIDAKQYQCSWYQHRAHKKAKGNLLPIKHEISEVK
SGKILEEKKSKTSAYIQTLIGMDFSQFTRSIMLAQGSFAAFLKSDIGDRAAILEKITGTA
IYAKISLNVHEKKRLEEDVLSKLQAGVDGLSLLSVENENLLEADLKVLNQQQSTQRQTFK
TLSEQLQWLNNIQQLQSNLSIYQSEFASAQQAQQAYIPEAKRLSIANKALEIDSQFRELS
YRRDTVQKLDIEQQSLMSQIPAQQESLTQAARHLDNANTLEKQASDNLQINLPLIAQVRE
LDSNIRQQSQSLGEDSQRKELLAGNVQILSQAIQSHQQTADSTKTQLNNIDNYFDNYPEL
SDLDTDMTIFDSSCQRLRALLEDNAKLSAARMSQHSHARQLQADFEILSKQQDTDLSLVA
QRREQLLNLQQQQAVIIQKQPLASMRGEQEQIDPIIIQIEQVSFKITQRSQLISQIHKIN
LTLPVLKQELMVLEDLVATHRTDIQSTKLKKQDKQTHLHLLQKIARLEDYILELKDGTPC
PLCGAHEHPYGKHHPLLDSQLDNKQALPLTQQTQQQIAELDILIEHLEQALSKHHIDHAT
KNETISNQQQQLVTLQQQCEMLSNDIQDSLLSLFNANQNCSKAIAGIIHPLYQLSKDINA
IDNDVERTLPLLNSVKQKLLEQKQSLKDLLFQHDDLTQSISELSIAIESDEKQHQVLMSK
INHLTTDIKLHSQKIDTTEDKIATNFLALTSLTSSILTLADKYPADNYAEYLSIDFKKAD
IQSALKQLDASTDEKTVLDSSNYERHIDRLRQQRSMLSQLKKYFNERKNSQQQLTNTLST
VSAQIDTKQTQLCTDESALKNLEHLIADKKIDLEMLKSKRTELFSDKNPESEDTLLRRTV
DEAKAKQANAQRQLDSTQQVLEQLQNRQRQLLAELQSATTALNTQQAVFMEHLTAAQFVD
EDAFTRARLPKEERDALHTRKLAIDSALQQAKSQLDSTQQSLEQNLSLAMTNVSQEMIAA
QHQHIQMEIDQLSQQIGAIVQKLKDNENQKGQRATQLTAINTQKEKLQVWQQLHTLIGSA
DGKKYRTFAQGLTFEVMISHANSQLQKMSDRYLLIHDDSNPLELNVIDNYQGGDIRSTKN
LSGGEGFIISLALALGLSQMASHNIRVDSLFLDEGFGTLDEESLDIALDTLTGLQQEGKL
IGIISHVQALKDRILTQIKVEKISGGFSQISGQGCRRVMSDKV
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaattgaactcagacttaaaaacctcaactccttaaaaggcgaatggcacatt
gattttagtgacgccgcttttcttaacgaaggtatctttgctattaccgggcaaacaggc
gctggcaagaccactattttagatgctatttgcttggcgctctacagccaaacgccacga
ctcggtgatattactggctctaccaatgagatcatgacccaaggtacaggagagtgctcg
gctgaagttattatcgagattgacgccaagcaatatcagtgttcatggtaccaacatcgt
gcccacaaaaaagccaaaggtaacttattaccgattaagcacgagattagcgaggtcaag
tctggcaagattttagaagagaaaaaatccaaaacctcagcttatattcaaacgcttatt
ggcatggattttagccaatttacccgctccatcatgcttgcgcaaggtagttttgccgcg
tttttaaaatctgatattggtgatagagcggcgattttggagaaaataactggtaccgct
atctatgccaaaatctcactcaatgttcatgagaaaaaacgcttggaagaagatgtgctc
agtaagttgcaggcaggcgttgatggcttgtctttactaagtgttgaaaacgaaaaccta
ttggaagccgatctaaaagtattgaatcagcagcagagtacgcagcgacaaacctttaag
acattaagtgagcagctacaatggctaaataacatacaacagctacaaagcaacctgtct
atttatcagagcgagtttgcaagcgcccagcaagcgcagcaagcttatattccagaggct
aagcgtttaagtattgcaaacaaggcattagagattgatagccagtttcgtgagcttagc
tatcgccgtgatacggtccagaagcttgatattgagcaacagagtttgatgagtcaaatc
cctgcccagcaagaatcgctgacgcaagctgctcgccatttagacaatgccaatacgcta
gaaaagcaagcatcagacaaccttcaaataaatttgcctctcatcgcacaggtacgcgaa
ttagacagcaatataaggcaacagtctcaatccttaggggaagatagtcagcgaaaggaa
ttattggcaggcaatgtacagatattaagccaagccatccaaagtcatcagcaaaccgcc
gatagcaccaaaactcagctaaataatatcgacaattactttgacaactacccagagctg
agtgaccttgataccgatatgacaatctttgatagtagctgtcaacgattaagggcgcta
ctagaagataatgctaaactttcagccgctaggatgagtcaacatagccatgcccgccag
ctacaagcggattttgagatattgtctaaacagcaagatactgatctttcattggtagcg
cagcggcgcgagcaactgctaaatctccaacagcagcaagcagtgatcattcaaaagcag
ccgcttgctagtatgcgcggtgagcaagaacaaatcgatccaatcatcatacaaattgag
caggtgagctttaagattacacagcgttctcagctgatcagtcaaatccataaaatcaat
ctcacgctaccggtattgaagcaagagctgatggtcttagaagatttagttgccactcat
cgcaccgacattcagagcactaagcttaaaaaacaagacaaacagacgcaccttcattta
ctgcaaaaaattgcaagacttgaagattatatcttggagcttaaagacggtacgccctgc
ccgctttgcggcgcgcatgagcatccttatggtaagcatcatccgctattggatagccaa
cttgacaataaacaagcattgccactaacacagcagacccagcagcaaatagctgagctt
gatatactcattgagcatctcgaacaagcgttatctaaacatcatatcgaccatgctact
aaaaatgagaccattagcaatcaacagcagcagttagtaacattacagcagcagtgtgag
atgttgagcaacgacattcaagatagcctactttcactttttaacgccaatcaaaattgt
tccaaagcgattgcagggattattcatccgctttatcaactgagtaaggatatcaatgcg
attgataatgacgttgaacgcacattacctttactaaacagcgtcaaacaaaagctactc
gagcaaaagcagtctcttaaagacttattgtttcaacatgatgacttgacacaaagcata
tcagagctctctattgctatagagagtgatgaaaagcagcatcaggtattgatgagcaag
atcaatcacctgacgacggatatcaagctacactcgcagaaaatagacactactgaagat
aaaatagccaccaactttttggcattaacctctcttactagcagtattctaactttggca
gataagtatccggcggataactatgcagaatacttaagtattgattttaaaaaagcagac
attcaaagcgcacttaagcaattggatgctagtactgatgagaaaaccgtactagatagc
agtaactatgagcgtcatattgacagattacgtcaacagcgcagcatgctaagtcagcta
aaaaaatattttaacgagagaaaaaacagccagcaacagctaaccaatacattaagtaca
gtgagcgctcaaattgacactaagcaaacacagctttgcacggatgaaagcgcactaaag
aatctcgaacacttaatagcggacaaaaagatagatcttgagatgctcaagagcaaaaga
acagagcttttttcagacaaaaacccagagtcagaagacactctactgcgccgcacagtg
gatgaggcaaaagccaaacaagcaaatgctcaaagacagctagacagcacgcagcaagta
ttagagcaattgcaaaacagacaacgacagctattggcagaattgcagtctgctacgaca
gcgctaaatacgcagcaagctgtatttatggagcatctaacagcggcgcagtttgtggat
gaagacgcttttacccgtgcgcgcctgcctaaagaagagcgtgatgctttacatactcgt
aagcttgcgattgacagcgccttgcagcaggcaaagtcacagttagatagcacccaacaa
tcattagagcagaacctatctcttgctatgacgaatgtcagccaagaaatgattgccgcc
caacatcagcatattcagatggagattgatcagctcagccaacagattggtgctattgtt
caaaagctcaaagacaatgagaaccaaaaaggtcaacgagcaacgcagcttaccgccatt
aatacgcaaaaagagaagttacaagtttggcagcagctgcatactttaattggttcagcc
gatggtaagaaatatcgtacctttgctcaaggcttaacctttgaagttatgattagccat
gccaatagccaactacaaaaaatgagtgaccgctatttgctgattcatgatgacagcaat
ccgcttgagcttaatgtgattgataactatcaaggcggcgatattcgcagcaccaaaaac
ttatctggtggtgaaggcttcattatcagtctcgcgctcgctcttggactatctcaaatg
gccagtcacaacatccgtgtggattcgctatttttggatgaaggttttggcacgcttgat
gaagagtcgttagatattgctctagataccttgacaggcttgcaacaagaagggaaattg
attggtattatctctcatgtacaggcgttaaaagatcgcattttgacccaaataaaggtc
gaaaaaatatcgggcggctttagccaaatcagcggtcaaggatgtcggcgcgttatgagt
gataaagtatga
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